RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GPR132Q9UNW8 380 aa12.06□□□□□ -0.48
PCDHA11-201ENST00000398640 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 PTGDSP41222 190 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM159AQ6UWV7 190 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 OR5P3Q8WZ94 311 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 CELA3BP08861 270 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 IFITM3Q01628 133 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 GCSAMLQ5JQS6 135 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 DEPPQ9NTK1 212 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 OR51G1Q8NGK1 321 aa12.05□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A10PA6NDY2 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A18PA6NE21 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A16PA6NEW6 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A20PA6NIJ5 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A8PA6NJQ4 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A7PA6NKC0 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A22PA8MWA6 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A12PA8MX19 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A5PA8MXJ8 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A23PA8MXZ1 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A15PP0C7V4 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A13PP0C7W8 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A14PP0C7W9 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 FAM90A24PP0C7X0 464 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 PPP1R27Q86WC6 154 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 TCF19Q9Y242 345 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 TCRBV4S1A1TA0A5B7 111 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 H0YL77 283 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 C8orf88P0DMB2 117 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 CLEC19AQ6UXS0 136 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 PIP4P1Q86T03 277 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 PPP1R3EQ9H7J1 279 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 BMPERQ8N8U9 685 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 Q96M66 194 aa12.04□□□□□ -0.48
PCDHA11-201ENST00000398640 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 C7orf71A4D174 169 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 F11RQ9Y624 299 aaKnown RBP12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 PINLYPA6NC86 204 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 IGHMP01871 453 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 RPLP1P05386 114 aaKnown RBP12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 GPR183P32249 361 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 HIST1H4GQ99525 98 aa12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
PCDHA11-201ENST00000398640 IL18BPO95998 194 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 TIMP3P35625 211 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 DSCR9P59020 149 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 MARVELD3Q96A59 401 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 WFIKKN1Q96NZ8 548 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 LINC01587Q99440 93 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 ANK1P16157 1881 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 PLXNA4Q9HCM2 1894 aa12.02□□□□□ -0.48
PCDHA11-201ENST00000398640 J3QW42 95 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 CEACAM4O75871 244 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 TRGC2P03986 189 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 CD24P25063 80 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 C3orf36Q3SXR2 165 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 SMDT1Q9H4I9 107 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 EGR4Q05215 589 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 MUC21Q5SSG8 566 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 SLC25A38Q96DW6 304 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 NPFFR1Q9GZQ6 430 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 RRHO14718 337 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 ZNF146Q15072 292 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 TRBV5-7A0A0A0MS05 114 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 THBDP07204 575 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 SPATA45Q537H7 98 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 SP5Q6BEB4 398 aaPredicted RBP12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 SELENOKQ9Y6D0 94 aa12.02□□□□□ -0.49
PCDHA11-201ENST00000398640 NYNRINQ9P2P1 1898 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms