RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SPTY2D1-AS1A0A0U1RR47 76 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 PDCD6O75340 191 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 REG1AP05451 166 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 CT45A10P0DMU9 189 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 CCL2P13500 99 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF137PP52743 207 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 GFERP55789 205 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 MKXQ8IYA7 352 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 CITED2Q99967 270 aaPredicted RBP6.47□□□□□ -1.37
VTI1A-201ENST00000393077 STRADBQ9C0K7 418 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 RARRES3Q9UL19 164 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 R4GN57 208 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 SHANK1Q9Y566 2161 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 IGKV1D-8A0A087WSZ0 117 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 TMPRSS3P57727 454 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF141Q15928 474 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 BCORP1Q8N888 145 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF721Q8TF20 911 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
VTI1A-201ENST00000393077 FGF21Q9NSA1 209 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 TMEM140Q9NV12 185 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 ARHGAP21Q5T5U3 1957 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 A0A0A6YYD4 124 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 TRAV5A0A0B4J249 113 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 TMEM262E9PQX1 116 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 F8W1H4 67 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 BCL3P20749 454 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 CSRP1P21291 193 aaKnown RBP6.47□□□□□ -1.37
VTI1A-201ENST00000393077 PPP1CAP62136 330 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 OR1C1Q15619 314 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 IL36GQ9NZH8 169 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 FBLN5Q9UBX5 448 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 PSG8Q9UQ74 426 aa6.47□□□□□ -1.37
VTI1A-201ENST00000393077 YPEL1O60688 119 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 PSG2P11465 335 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 CENPWQ5EE01 88 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 PRSS41Q7RTY9 318 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 YPEL2Q96QA6 119 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 SPANXA1Q9NS26 97 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF581Q9P0T4 197 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 DUSP13Q9UII6 198 aa6.46□□□□□ -1.37
VTI1A-201ENST00000393077 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 LGALS4P56470 323 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 ATP5G2Q06055 141 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 ZP4Q12836 540 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 GUSBP1Q15486 140 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 ARTNQ5T4W7 220 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 H1FNTQ75WM6 255 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-201ENST00000393077 RBMXL3Q8N7X1 1067 aaKnown RBP6.46□□□□□ -1.38
VTI1A-201ENST00000393077 OR9G4Q8NGQ1 327 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 MCRIP2Q9BUT9 160 aaKnown RBP6.46□□□□□ -1.38
VTI1A-201ENST00000393077 DUSP23Q9BVJ7 150 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-201ENST00000393077 SSUH2Q9Y2M2 353 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 DIDO1Q9BTC0 2240 aaKnown RBP6.46□□□□□ -1.38
VTI1A-201ENST00000393077 TRGV10A0A0A0MS01 117 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 LRRC30A6NM36 301 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 LYPD3O95274 346 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 LINC00271P0C7V0 271 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 ID1P41134 155 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 ERVK-16P61578 105 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 PSG5Q15238 335 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 CBLN3Q6UW01 205 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 GRAMD2BQ96HH9 432 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 VGLL1Q99990 258 aa6.46□□□□□ -1.38
VTI1A-201ENST00000393077 LOC101059948A0A1B0GTJ6 334 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 RPL32P62910 135 aaKnown RBP6.45□□□□□ -1.38
VTI1A-201ENST00000393077 ZXDAP98168 799 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF726P1Q15940 193 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 C3AR1Q16581 482 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 MYO7BQ6PIF6 2116 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 TCF24Q7RTU0 167 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 SH2D6Q7Z4S9 175 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 ARPC1AQ92747 370 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 GGTLC1Q9BX51 225 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 C1QTNF4Q9BXJ3 329 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 DEFB126Q9BYW3 111 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 RNASE7Q9H1E1 156 aaKnown RBP6.45□□□□□ -1.38
VTI1A-201ENST00000393077 OR2W1Q9Y3N9 320 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 ATP5IP56385 69 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-201ENST00000393077 SPINK9Q5DT21 86 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 SSMEM1Q8WWF3 244 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 RNF115Q9Y4L5 304 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 FANCMQ8IYD8 2048 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 PRSS1P07477 247 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 CELA3BP08861 270 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 FAM53BQ14153 422 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 GJC3Q8NFK1 279 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 C8orf44Q96CB5 159 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
VTI1A-201ENST00000393077 CACNA1GO43497 2377 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 TMPRSS2O15393 492 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 DHRS3O75911 302 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms