RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 TMEM88BA6NKF7 163 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 TBX6O95947 436 aaPredicted RBP5.12□□□□□ -1.59
SCN2A-202ENST00000375427 CCL1P22362 96 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 FXYD3Q14802 87 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 CXCL16Q9H2A7 254 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 RLFQ13129 1914 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 SPHKAPQ2M3C7 1700 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 TNS3Q68CZ2 1445 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 LILRA1O75019 489 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 ACTL10Q5JWF8 245 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 CALYQ9NYX4 217 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 PROCRQ9UNN8 238 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 LRP12Q9Y561 859 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 GREB1LQ9C091 1923 aaPredicted RBP5.12□□□□□ -1.59
SCN2A-202ENST00000375427 SAMD9Q5K651 1589 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 SPATA31E1Q6ZUB1 1445 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 TRGV2A0A075B6R0 118 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 C9JCJ5 164 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 PSCAO43653 123 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 GLULP15104 373 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 ZNF121P58317 390 aaPredicted RBP5.12□□□□□ -1.59
SCN2A-202ENST00000375427 C3AR1Q16581 482 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 C1orf140Q5VVS0 124 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 C22orf39Q6P5X5 142 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 FAM19A2Q8N3H0 131 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 THAP8Q8NA92 274 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 C10orf105Q8TEF2 133 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 NRG4Q8WWG1 115 aa5.12□□□□□ -1.59
SCN2A-202ENST00000375427 PLPP3O14495 311 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 LAMTOR5O43504 91 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 ZNF250P15622 560 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 LAGE3Q14657 143 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 TMEM179BQ7Z7N9 219 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 C9orf62Q8N4C0 152 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 OR51G1Q8NGK1 321 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 TMEM171Q8WVE6 324 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 MRPL32Q9BYC8 188 aaKnown RBP5.11□□□□□ -1.59
SCN2A-202ENST00000375427 CSTL1Q9H114 145 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM53CQ9NYF3 392 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 TRPM1Q7Z4N2 1603 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 CELA2AP08217 269 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 RND2P52198 227 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 WDR82Q6UXN9 313 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 GPBAR1Q8TDU6 330 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 WDYHV1Q96HA8 205 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 EFCAB6Q5THR3 1501 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM90A10PA6NDY2 464 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM90A8PA6NJQ4 464 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM90A13PP0C7W8 464 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM90A24PP0C7X0 464 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 RASL10AQ92737 203 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM236AA0A1B0GUQ0 79 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FAM236BA0A1B0GV22 79 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 K7EP13 123 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 SLC25A16P16260 332 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 ALKBH3Q96Q83 286 aaPredicted RBP5.11□□□□□ -1.59
SCN2A-202ENST00000375427 MESP1Q9BRJ9 268 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 ABCA9Q8IUA7 1624 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 C2CD3Q4AC94 2353 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 ELANEP08246 267 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 SNRPCP09234 159 aaKnown RBP5.11□□□□□ -1.59
SCN2A-202ENST00000375427 SIGLEC15Q6ZMC9 328 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 IRF7Q92985 503 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 SMIM2Q9BVW6 85 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 PRR14Q9BWN1 585 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 IGHV1-24A0A0C4DH33 117 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 TM4SF4P48230 202 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 FOXA3P55318 350 aaPredicted RBP5.11□□□□□ -1.59
SCN2A-202ENST00000375427 ACP7Q6ZNF0 438 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 C15orf53Q8NAA6 179 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 IL36BQ9NZH7 164 aa5.11□□□□□ -1.59
SCN2A-202ENST00000375427 GPR25O00155 361 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 AMBPP02760 352 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 IL13P35225 146 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 BCDIN3DQ7Z5W3 292 aaKnown RBP5.1□□□□□ -1.59
SCN2A-202ENST00000375427 ARHGAP5-AS1Q96IT6 56 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 PXDNLA1KZ92 1463 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 DEFB108AA8MXU0 73 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 PRR35P0CG20 571 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 C6orf226Q5I0X4 101 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 RNF138Q8WVD3 245 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 A0A087WWC5 75 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 SLC25A48Q6ZT89 311 aaKnown RBP5.1□□□□□ -1.59
SCN2A-202ENST00000375427 LPPQ93052 612 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 YPEL4Q96NS1 127 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 DOCK2Q92608 1830 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 USP32Q8NFA0 1604 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 A0A0U1RRA0 63 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 USP17L23D6RBM5 183 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 LGALS2P05162 132 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 TMEM52BQ4KMG9 183 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 FOXB2Q5VYV0 432 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 WFDC8Q8IUA0 241 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 ZNF740Q8NDX6 193 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 IP6K3Q96PC2 410 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 FRMPD1Q5SYB0 1578 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 hDV102S1A0JD36 115 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 HIGD1CA8MV81 97 aa5.1□□□□□ -1.59
SCN2A-202ENST00000375427 NDUFC1O43677 76 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms