RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 LOC105371242A0A075B767 164 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 PPIAL4CA0A0B4J2A2 164 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 UBE2L5PA0A1B0GUS4 154 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 SNAPINO95295 136 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 PPIAL4GP0DN37 164 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 RELBQ01201 579 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 PRSS57Q6UWY2 283 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 WFDC11Q8NEX6 87 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 OR4A16Q8NH70 328 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 TAF15Q92804 592 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBE3D-203ENST00000369747 ZNF714Q96N38 554 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 TMEM140Q9NV12 185 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 ZNRD1Q9P1U0 126 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 FLNAP21333 2647 aaKnown RBP14.05□□□□□ -0.16
UBE3D-203ENST00000369747 BTBD17A6NE02 478 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 HEPN1Q6WQI6 88 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 C8orf46Q8TAG6 207 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 ADTRPQ96IZ2 230 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 PBDC1Q9BVG4 233 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 VSIRQ9H7M9 311 aa14.05□□□□□ -0.16
UBE3D-203ENST00000369747 TEX15Q9BXT5 2789 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 IFNA17P01571 189 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 DLX6P56179 175 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 SPCS3P61009 180 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 RPS16P62249 146 aaKnown RBP14.04□□□□□ -0.16
UBE3D-203ENST00000369747 ATP6V1FQ16864 119 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 PDLIM3Q53GG5 364 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-203ENST00000369747 C11orf42Q8N5U0 333 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 SFT2D1Q8WV19 159 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 RARRES2Q99969 163 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 RPRMQ9NS64 109 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 KPTNQ9Y664 436 aa14.04□□□□□ -0.16
UBE3D-203ENST00000369747 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 DLX1P56177 255 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 SERF2P84101 59 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 TAGLNQ01995 201 aaKnown RBP14.03□□□□□ -0.16
UBE3D-203ENST00000369747 PAX2Q02962 417 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 OR10P1Q8NGE3 313 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 RBMXL1Q96E39 390 aaKnown RBP14.03□□□□□ -0.16
UBE3D-203ENST00000369747 TMEM147Q9BVK8 224 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 KIAA1456Q9P272 454 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 ARG1P05089 322 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 CT45A6P0DMU7 189 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 CT45A5P0DMU8 189 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 CT45A7P0DMV0 189 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 PINX1Q96BK5 328 aaKnown RBP14.03□□□□□ -0.16
UBE3D-203ENST00000369747 FOXC2Q99958 501 aa14.03□□□□□ -0.16
UBE3D-203ENST00000369747 TRAV1-1A0A0B4J248 108 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 RBFOX3A6NFN3 312 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 LIPFP07098 398 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 VDAC2P45880 294 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-203ENST00000369747 ARF6P62330 175 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 PRB3Q04118 309 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-203ENST00000369747 ZNF726P1Q15940 193 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 VWC2Q2TAL6 325 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 DHRS7BQ6IAN0 325 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-203ENST00000369747 OR4A47Q6IF82 309 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 TMEM88Q6PEY1 159 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 CENPVQ7Z7K6 275 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-203ENST00000369747 ZNF429Q86V71 674 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 CLRN3Q8NCR9 226 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 RHOVQ96L33 236 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 ONECUT1Q9UBC0 465 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 TIMM9Q9Y5J7 89 aa14.02□□□□□ -0.16
UBE3D-203ENST00000369747 CR1P17927 2039 aa14.02□□□□□ -0.17
UBE3D-203ENST00000369747 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
UBE3D-203ENST00000369747 ZNF833PQ6ZTB9 187 aa14.02□□□□□ -0.17
UBE3D-203ENST00000369747 SLC35B3Q9H1N7 401 aa14.02□□□□□ -0.17
UBE3D-203ENST00000369747 SMDT1Q9H4I9 107 aa14.02□□□□□ -0.17
UBE3D-203ENST00000369747 TNCP24821 2201 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 LOC105371267A0A1B0GV96 52 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 FOXH1O75593 365 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 LY86O95711 162 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 HBE1P02100 147 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 POU2AF1Q16633 256 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 SSX7Q7RTT5 188 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 CBLN2Q8IUK8 224 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 TCF19Q9Y242 345 aa14.01□□□□□ -0.17
UBE3D-203ENST00000369747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.01□□□□□ -0.176e-9■■■■□ 26.2
UBE3D-203ENST00000369747 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 LOXL1Q08397 574 aaPredicted RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 TMEM41BQ5BJD5 291 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 Q8N7P7 452 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 MBD3L1Q8WWY6 194 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 ZFHX3Q15911 3703 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 IGHV2-70DA0A0C4DH43 119 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 IGHV1-8P0DP01 117 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 FGF7P21781 194 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 HAGHQ16775 308 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 C17orf50Q8WW18 174 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 TMEM14BQ9NUH8 114 aa14□□□□□ -0.17
UBE3D-203ENST00000369747 FOXA2Q9Y261 457 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms