RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NHLRC2Q8NBF2 726 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 MRGPRDQ8TDS7 321 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 AKAP6Q13023 2319 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 VENTXO95231 258 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 CA2P00918 260 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 IGLL1P15814 213 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 YPEL3P61236 119 aaPredicted RBP13.55□□□□□ -0.24
CCDC8-201ENST00000307522 FOXB1Q99853 325 aa13.55□□□□□ -0.24
CCDC8-201ENST00000307522 ZNF716A6NP11 495 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 CELA3BP08861 270 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MGST1P10620 155 aaKnown RBP13.54□□□□□ -0.24
CCDC8-201ENST00000307522 NIT1Q86X76 327 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 PLPPR2Q96GM1 343 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
CCDC8-201ENST00000307522 SERTAD4Q9NUC0 356 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 RRHO14718 337 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 NUDT3O95989 172 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 RIPPLY2Q5TAB7 128 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 LHFPL2Q6ZUX7 228 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 BORCS7Q96B45 105 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 CLEC5AQ9NY25 188 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 IL19Q9UHD0 177 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MUC21A0A0G2JKD1 596 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MUC21A0A140T8X8 626 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 SYNGR1O43759 233 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
CCDC8-201ENST00000307522 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MUC21Q5SSG8 566 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 STUMQ69YW2 141 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 PCSK4Q6UW60 755 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 SSMEM1Q8WWF3 244 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 CLCF1Q9UBD9 225 aa13.54□□□□□ -0.24
CCDC8-201ENST00000307522 MAP1AP78559 2803 aaPredicted RBP13.53□□□□□ -0.24
CCDC8-201ENST00000307522 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 NGFP01138 241 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 PPOXP50336 477 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 ZNF585BQ52M93 769 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 PRR27Q6MZM9 219 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 SPRY4Q9C004 299 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 BOKQ9UMX3 212 aaPredicted RBP13.53□□□□□ -0.24
CCDC8-201ENST00000307522 CD24P25063 80 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 GPR6P46095 362 aaPredicted RBP13.53□□□□□ -0.24
CCDC8-201ENST00000307522 C16orf54Q6UWD8 224 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 FGFRL1Q8N441 504 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 FDCSPQ8NFU4 85 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 ABHD14BQ96IU4 210 aa13.53□□□□□ -0.24
CCDC8-201ENST00000307522 SYNGR4O95473 234 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 HIST3H3Q16695 136 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 TMEM108Q6UXF1 575 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 TCTEX1D1Q8N7M0 179 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 IL36GQ9NZH8 169 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.24
CCDC8-201ENST00000307522 hDV102S1A0JD36 115 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 CD99P14209 185 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 CA7P43166 264 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 RPL31P62899 125 aaKnown RBP13.52□□□□□ -0.24
CCDC8-201ENST00000307522 PRDX4Q13162 271 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 SSBP3Q9BWW4 388 aaPredicted RBP13.52□□□□□ -0.24
CCDC8-201ENST00000307522 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.24
CCDC8-201ENST00000307522 TACC2O95359 2948 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 PLCE1Q9P212 2302 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 ZNF324O75467 553 aaPredicted RBP13.52□□□□□ -0.25
CCDC8-201ENST00000307522 CA6P23280 308 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 SPATA31B1PQ5VZV4 182 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 KCNS1Q96KK3 526 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.25
CCDC8-201ENST00000307522 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
CCDC8-201ENST00000307522 A0A1W2PN81 502 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 OR10P1Q8NGE3 313 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 TMEM38BQ9NVV0 291 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 PPBPP02775 128 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 S100GP29377 79 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 FOXE3Q13461 319 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 TSKUQ8WUA8 353 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 FGF23Q9GZV9 251 aaPredicted RBP13.51□□□□□ -0.25
CCDC8-201ENST00000307522 ZGRF1Q86YA3 2104 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 ZNF439Q8NDP4 499 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 OR4F17Q8NGA8 305 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 FAM173AQ9BQD7 235 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 MTCH1Q9NZJ7 389 aa13.51□□□□□ -0.25
CCDC8-201ENST00000307522 ARFGEF3Q5TH69 2177 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 FOXH1O75593 365 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 MIC13Q5XKP0 118 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
CCDC8-201ENST00000307522 OR5A2Q8NGI9 324 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 OR1F12Q8NHA8 337 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 TMEM54Q969K7 222 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 SSBP4Q9BWG4 385 aaPredicted RBP13.5□□□□□ -0.25
CCDC8-201ENST00000307522 IL36BQ9NZH7 164 aa13.5□□□□□ -0.25
CCDC8-201ENST00000307522 SPTBN1Q01082 2364 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms