RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 TMEM219Q86XT9 240 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 ASB13Q8WXK3 278 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 SSX3Q99909 188 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 IFI27L2Q9H2X8 130 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 ZNF705EA8MWA4 302 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 C17orf112F2Z3M2 114 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 MOSP00540 346 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2G3Q8NGZ4 309 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 TMED6Q8WW62 240 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 HSPE1P61604 102 aaKnown RBP10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 FXYD3Q14802 87 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 Q56UQ5 140 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 OR5T1Q8NG75 326 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 FAM213BQ8TBF2 198 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 CORO2AQ92828 525 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 RBMXL1Q96E39 390 aaKnown RBP10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 QTRT1Q9BXR0 403 aaKnown RBP10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 NPY1RP25929 384 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 ZNF880Q6PDB4 577 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 TREM1Q9NP99 234 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 OR5AC2Q9NZP5 309 aa10.21□□□□□ -0.77
SCAMP1-207ENST00000621999 ZFP36P26651 326 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 SUPT4H1P63272 117 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 TPTE2P1Q5T6R2 138 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 FAM103A1Q9BTL3 118 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 THYN1Q9P016 225 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 TCF19Q9Y242 345 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 NPIPB11E5RHQ5 1161 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 JTBO76095 146 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 MT-CO2P00403 227 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 OR5G3P0C626 314 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 SPCS3P61009 180 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 NDUFA5Q16718 116 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 Q5BKY6 102 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 Q6ZRG5 221 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 IL22RA2Q969J5 263 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 RBKSQ9H477 322 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 UQCC1Q9NVA1 299 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 WSB1Q9Y6I7 421 aa10.21□□□□□ -0.78
SCAMP1-207ENST00000621999 NOTCH3Q9UM47 2321 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 UBA52P62987 128 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 CR1LQ2VPA4 569 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 ZNF383Q8NA42 475 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 HAX1O00165 279 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 IL17RELQ6ZVW7 336 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 LSM10Q969L4 123 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 TSPAN15O95858 294 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 FGF7P21781 194 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 TNFRSF9Q07011 255 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 HRH4Q9H3N8 390 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 FBXL17Q9UF56 701 aa10.2□□□□□ -0.78
SCAMP1-207ENST00000621999 H3BUX3 64 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 NHLH2Q02577 135 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 TMEM249Q2WGJ8 235 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 TMEM182Q6ZP80 229 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 MS4A10Q96PG2 267 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 CT45A6P0DMU7 189 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 CT45A5P0DMU8 189 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 CT45A7P0DMV0 189 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 PF4V1P10720 104 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 HTR2BP41595 481 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 KIAA1324LA8MWY0 1029 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 NUDT19A8MXV4 375 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 IGKV1-16P04430 117 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 DYNLT3P51808 116 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 LOXL3P58215 753 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 ZNF660Q6AZW8 331 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 DNM1P46Q6ZS02 220 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 RPS10-NUDT3A0A1W2PQS6 291 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 TAAR5O14804 337 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 RPL11P62913 178 aaKnown RBP10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 SLC24A4Q8NFF2 622 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 LHFPL5Q8TAF8 219 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 GSX2Q9BZM3 304 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 ANAPC10Q9UM13 185 aa10.19□□□□□ -0.78
SCAMP1-207ENST00000621999 NBR2O15453 112 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 UBE2E1P51965 193 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 NABP2Q9BQ15 211 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 SLC25A33Q9BSK2 321 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 TMEM56-RWDD3S4R434 201 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 HLA-GP17693 338 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 MINOS1Q5TGZ0 78 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 BAP18Q8IXM2 172 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 ZNF418Q8TF45 676 aaPredicted RBP10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 MALSU1Q96EH3 234 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 SLC25A32Q9H2D1 315 aa10.18□□□□□ -0.78
SCAMP1-207ENST00000621999 MINOS1-NBL1R4GNA1 71 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms