RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 C9JCJ5 164 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 DLX6P56179 175 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 OR13H1Q8NG92 308 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 MRPS18BQ9Y676 258 aaKnown RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 RPS27P42677 84 aaKnown RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ALKBH3Q96Q83 286 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 OR2H1Q9GZK4 316 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 WDR54Q9H977 334 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 RRHO14718 337 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 VSTM2LQ96N03 204 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 IGHMP01871 453 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 GZMBP10144 247 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 INAFM2P0DMQ5 153 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 PRSS2P07478 247 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 FGF12P61328 243 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 CCL14Q16627 93 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ORMDL2Q53FV1 153 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ZNF793Q6ZN11 406 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 GTSF1LQ9H1H1 148 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 KLF2Q9Y5W3 355 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 KLKB1P03952 638 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 POU2F2P09086 479 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ZNF562Q6V9R5 426 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 SPAG8Q99932 426 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 TRAV5A0A0B4J249 113 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 J3QW42 95 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 CCL20P78556 96 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 PYY3Q5JQD4 70 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 GCSAMQ8N6F7 178 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 ABHD3Q8WU67 409 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 APOBEC4Q8WW27 367 aaKnown RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 RPRMQ9NS64 109 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 K7N7A8 449 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 TSPAN7P41732 249 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 SLC37A2Q8TED4 501 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 CA6P23280 308 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 CACNG8Q8WXS5 425 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 MDKP21741 143 aaPredicted RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 TUSC5Q8IXB3 177 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 Q96M66 194 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 ABHD14AQ9BUJ0 271 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 A0A0U1RQS6 177 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 LHX2P50458 406 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 UCP2P55851 309 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 PRSS8Q16651 343 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 ZNF205O95201 554 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 NANOS3P60323 173 aaKnown RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 HARBI1Q96MB7 349 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 TRAV38-1A0A0B4J264 116 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 OR52M1Q8NGK5 317 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 ZIC1Q15915 447 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 KISS1RQ969F8 398 aaPredicted RBP7.56□□□□□ -1.2
TTC28-208ENST00000612946 LRRC61Q9BV99 259 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 IFITM1P13164 125 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 CEACAM1P13688 526 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 C10orf91Q5T1B1 145 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 BATF2Q8N1L9 274 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 ADAMTSL1Q8N6G6 1762 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 OR4C13Q8NGP0 309 aa7.56□□□□□ -1.2
TTC28-208ENST00000612946 TMEFF1Q8IYR6 380 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SMIM14Q96QK8 99 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 HEXA-AS1Q9H8Q6 139 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 RPL23P62829 140 aaKnown RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 MOB3BQ86TA1 216 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 PEX7O00628 323 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 APOHP02749 345 aaPredicted RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 WIPI1Q5MNZ9 446 aaPredicted RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 CRISPLD2Q9H0B8 497 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 NHP2Q9NX24 153 aaKnown RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 TBC1D29Q9UFV1 150 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 CDAP32320 146 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SHISA6Q6ZSJ9 500 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 CADM4Q8NFZ8 388 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 OR5P3Q8WZ94 311 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 PPIAL4EA0A075B759 164 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 MGPP08493 103 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 PPIAL4FP0DN26 164 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 ANOS1P23352 680 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 CD27P26842 260 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SFTPA2Q8IWL1 248 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SFTPA1Q8IWL2 248 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 PPIAL4AQ9Y536 164 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 A0A1W2PS18 150 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 RBMY1BA6NDE4 496 aaKnown RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 RBMY1EA6NEQ0 496 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms