RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 MARCH11A6NNE9 402 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 TMEM155Q4W5P6 130 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 CYP2G1PQ6ZSU1 146 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
HMGA2-210ENST00000541363 CLEC7AQ9BXN2 247 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 TLNRD1Q9H1K6 362 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
HMGA2-210ENST00000541363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
HMGA2-210ENST00000541363 ST6GALNAC6Q969X2 333 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 H3BTX0 84 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 MIXL1Q9H2W2 232 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 A8MWV9 139 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 TIMM23BQ5SRD1 257 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 ORMDL3Q8N138 153 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 LINC01555Q8NAE3 123 aa13.19□□□□□ -0.3
HMGA2-210ENST00000541363 RIPPLY3P57055 190 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 ITLN1Q8WWA0 313 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 A0A1B0GTL3 188 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 IL36BQ9NZH7 164 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 F8WEM9 126 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 H3BUT2 72 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 IGHV1OR15-9A0A0B4J2B8 117 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 A0A0G2JLM5 398 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 M0R2P5 195 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 GCHFRP30047 84 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 Q6AWC8 147 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 TMEM186Q96B77 213 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 NOVP48745 357 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 ATP5J2P56134 94 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
HMGA2-210ENST00000541363 STHQ8IWL8 128 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 TTTY12Q9BZ98 90 aa13.18□□□□□ -0.3
HMGA2-210ENST00000541363 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 BGLAPP02818 100 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 CTGFP29279 349 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 RND3P61587 244 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 P2RY6Q15077 328 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 ST20Q9HBF5 79 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 ZNF257Q9Y2Q1 563 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 FHITP49789 147 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 PEAR1Q5VY43 1037 aaPredicted RBP13.17□□□□□ -0.3
HMGA2-210ENST00000541363 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 ISXQ2M1V0 245 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 SMIM8Q96KF7 97 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 MPDZO75970 2070 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 ATP5IP56385 69 aaPredicted RBP13.17□□□□□ -0.3
HMGA2-210ENST00000541363 CD300CQ08708 224 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 WDR54Q9H977 334 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 LAMTOR3Q9UHA4 124 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 FOXH1O75593 365 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 OR4X2Q8NGF9 303 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 VENTXO95231 258 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 RPL34P49207 117 aaKnown RBP13.17□□□□□ -0.3
HMGA2-210ENST00000541363 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
HMGA2-210ENST00000541363 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
HMGA2-210ENST00000541363 C1QL1O75973 258 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 GATD1Q8NB37 220 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 ZG16O60844 167 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
HMGA2-210ENST00000541363 GAGE2BQ13066 116 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 JPT2Q9H910 190 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 ODAMA1E959 279 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 SPINT1O43278 529 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 CTSSP25774 331 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 C1QL3Q5VWW1 255 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 NHP2Q9NX24 153 aaKnown RBP13.16□□□□□ -0.3
HMGA2-210ENST00000541363 HBDP02042 147 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 UCP3P55916 312 aa13.16□□□□□ -0.3
HMGA2-210ENST00000541363 KMT2EQ8IZD2 1858 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 OR9G1Q8NH87 305 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 MYEOVQ96EZ4 313 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 IGLV3-16A0A075B6K0 115 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 PGFP49763 221 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 RPP21Q9H633 154 aaKnown RBP13.15□□□□□ -0.3
HMGA2-210ENST00000541363 JPT1Q9UK76 154 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 DPM2O94777 84 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 EGR1P18146 543 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 DCAF10Q5QP82 559 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 LINC00518Q8N0U6 118 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 AHRRA9YTQ3 701 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 DANCRP0C864 163 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 COQ2Q96H96 371 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms