RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 EWSR1Q01844 656 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC6-203ENST00000518638 GINS1Q14691 196 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 DEFB135Q30KP9 77 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 DEFB114Q30KQ6 69 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF554Q86TJ5 538 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 PRSS35Q8N3Z0 413 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF439Q8NDP4 499 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 BBS1Q8NFJ9 593 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 PXT1Q8NFP0 134 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 OR5D18Q8NGL1 313 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 PLPPR1Q8TBJ4 325 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
CCDC6-203ENST00000518638 C4orf36Q96KX1 117 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 RDH12Q96NR8 316 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 APOL4Q9BPW4 351 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 SULT4A1Q9BR01 284 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 MRPL20Q9BYC9 149 aaKnown RBP4.49□□□□□ -1.69
CCDC6-203ENST00000518638 CSTL1Q9H114 145 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
CCDC6-203ENST00000518638 PAK1IP1Q9NWT1 392 aaPredicted RBP4.49□□□□□ -1.69
CCDC6-203ENST00000518638 PTTG2Q9NZH5 202 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 OR2W1Q9Y3N9 320 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 VPS13DQ5THJ4 4388 aa4.49□□□□□ -1.69
CCDC6-203ENST00000518638 IGHV3-43A0A0B4J1X8 118 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CCDC182A6NF36 153 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 METTL15A6NJ78 407 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FAM223BA6NKX1 122 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 SLC31A2O15432 143 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CCDC22O60826 627 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CA11O75493 328 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CLN5O75503 358 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 OR7C1O76099 320 aaPredicted RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 APOHP02749 345 aaPredicted RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 P0DMU3 169 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FAM231AP0DMU4 169 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FAM231CP0DMU5 169 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 IGHV3-43DP0DP04 118 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 RRASP10301 218 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 RPA2P15927 270 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 EPHA2P29317 976 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 KISS1Q15726 138 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 MPV17LQ2QL34 196 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CT45A1Q5HYN5 189 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 NHLRC3Q5JS37 347 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 GLT8D1Q68CQ7 371 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF57Q68EA5 555 aaPredicted RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 OR2T5Q6IEZ7 315 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 PLEKHG7Q6ZR37 379 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF833PQ6ZTB9 187 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 ERASQ7Z444 233 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 GID4Q8IVV7 300 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FAM223AQ8IWN6 122 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 SLC38A6Q8IZM9 456 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 TCEANCQ8N8B7 351 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 SUMF2Q8NBJ7 301 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 OR2T29Q8NH02 315 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CT45A3Q8NHU0 189 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 NEK7Q8TDX7 302 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 GIPC3Q8TF64 312 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 DNAJC9Q8WXX5 260 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FGGYQ96C11 551 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 CMTM5Q96DZ9 223 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 ADAT3Q96EY9 351 aaPredicted RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 ATP6V1G3Q96LB4 118 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 TSNAXQ99598 290 aaKnown RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 NIPSNAP1Q9BPW8 284 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FAM103A1Q9BTL3 118 aaKnown RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 C6orf62Q9GZU0 229 aaPredicted RBP4.48□□□□□ -1.69
CCDC6-203ENST00000518638 VCX2Q9H322 139 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FBXL15Q9H469 300 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 SPACA1Q9HBV2 294 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 FGFR1OP2Q9NVK5 253 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 PIPOXQ9P0Z9 390 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 JPT1Q9UK76 154 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 TRAPPC2LQ9UL33 140 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 WASHC3Q9Y3C0 194 aa4.48□□□□□ -1.69
CCDC6-203ENST00000518638 TRAV25A0A0B4J276 109 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 A0A1W2PS18 150 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 C2orf70A6NJV1 201 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 IGLL5B9A064 214 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 LGALS9O00182 355 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 BMPR1BO00238 502 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 CHEK1O14757 476 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 SULT1B1O43704 296 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 FADS2O95864 444 aaKnown RBP4.47□□□□□ -1.69
CCDC6-203ENST00000518638 CA2P00918 260 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 HBZP02008 142 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 SCTP09683 121 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 FOLR2P14207 255 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 ATP6V1B2P21281 511 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 FXYD3Q14802 87 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 RSU1Q15404 277 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 SPHARQ15513 63 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 KCTD21Q4G0X4 260 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 LY6G6FQ5SQ64 297 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF691Q5VV52 312 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 ZNF497Q6ZNH5 498 aa4.47□□□□□ -1.69
CCDC6-203ENST00000518638 COX8CQ7Z4L0 72 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms