RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 IGLV2-14P01704 120 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 IL6RP08887 468 aaPredicted RBP11.67□□□□□ -0.54
TPM3-219ENST00000509409 CD81P60033 236 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
TPM3-219ENST00000509409 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 IDNKQ5T6J7 187 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 SECTM1Q8WVN6 248 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 YTHDF1Q9BYJ9 559 aaKnown RBP11.67□□□□□ -0.54
TPM3-219ENST00000509409 SLC2A8Q9NY64 477 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 ZNF257Q9Y2Q1 563 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 DYNC2H1Q8NCM8 4307 aaKnown RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 TNFSF12O43508 249 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 TPPPO94811 219 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 OR2C1O95371 312 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 HLA-AP01891 365 aaKnown RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 CLEC2LP0C7M8 214 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 FCGR2CP31995 323 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 MAS1LP35410 378 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 KIR2DS2P43631 304 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 GUCA2BQ16661 112 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 PUSL1Q8N0Z8 303 aaKnown RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 BEST4Q8NFU0 473 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 GPHA2Q96T91 129 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 NEURL2Q9BR09 285 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 THAP7Q9BT49 309 aaPredicted RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 PLEKHA3Q9HB20 300 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 SLC2A9Q9NRM0 540 aa11.66□□□□□ -0.54
TPM3-219ENST00000509409 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
TPM3-219ENST00000509409 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 NPIPB5A8MRT5 1133 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 E7EUB6 86 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 DHFRP00374 187 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 FCER2P06734 321 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 PTHLHP12272 177 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 DEFA4P12838 97 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 FOLR2P14207 255 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 DEFB114Q30KQ6 69 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 CLEC19AQ6UXS0 136 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 OR5H6Q8NGV6 325 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 AIFM2Q9BRQ8 373 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 HRASLSQ9HDD0 168 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 S4R3C0 116 aa11.65□□□□□ -0.54
TPM3-219ENST00000509409 TNCP24821 2201 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ZNF320A2RRD8 509 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 C2orf70A6NJV1 201 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ZNF785A8K8V0 405 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 NDUFB8O95169 186 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ZNF735P0CB33 412 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 PSMB6P28072 239 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ARL3P36405 182 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 RPL8P62917 257 aaKnown RBP11.64□□□□□ -0.55
TPM3-219ENST00000509409 EIF4EBP1Q13541 118 aaPredicted RBP11.64□□□□□ -0.55
TPM3-219ENST00000509409 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 HOGA1Q86XE5 327 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 SPAG16Q8N0X2 631 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 DEFB125Q8N687 156 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 SLC5A7Q9GZV3 580 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 DIABLOQ9NR28 239 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 ETV7Q9Y603 341 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
TPM3-219ENST00000509409 TENM2Q9NT68 2774 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 REG1AP05451 166 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 CD7P09564 240 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 MYOD1P15172 320 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 AREGP15514 252 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
TPM3-219ENST00000509409 HLA-GP17693 338 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 FXYD4P59646 89 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 ZNF773Q6PK81 442 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 LAX1Q8IWV1 398 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 ZBTB34Q8NCN2 500 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 OR13F1Q8NGS4 319 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 FANCD2OSQ96PS1 177 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 RETNQ9HD89 108 aa11.63□□□□□ -0.55
TPM3-219ENST00000509409 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
TPM3-219ENST00000509409 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 A6NJ64 397 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 OR11H12B2RN74 326 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 LGALS9O00182 355 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SULT1C2O00338 296 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 PPYP01298 95 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 CRYGCP07315 174 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 EDN2P20800 178 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SCAND1P57086 179 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 CATR1Q13166 79 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms