RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 RNFT1Q5M7Z0 435 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF66Q6ZN08 573 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 RPRMLQ8N4K4 120 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 CLRN3Q8NCR9 226 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 MRPL30Q8TCC3 161 aaKnown RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 C18orf12Q96KH6 178 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 REG4Q9BYZ8 158 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 Q9UFV3 132 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 MMP24Q9Y5R2 645 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 MALRD1Q5VYJ5 2156 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 COL5A1P20908 1838 aaPredicted RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 FGF16O43320 207 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 GNG7O60262 68 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 SFTA3P0C7M3 94 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 RANP62826 216 aaKnown RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 TIMM23BQ5SRD1 257 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR10G4Q8NGN3 311 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR10G9Q8NGN4 311 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR10G7Q8NGN6 311 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 R3HDM4Q96D70 268 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 CCL13Q99616 98 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 SLC35B3Q9H1N7 401 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF665Q9H7R5 613 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 SLC25A22Q9H936 323 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM167BQ9NRX6 74 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF581Q9P0T4 197 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM56-RWDD3S4R434 201 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OPN1MWP04001 364 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 CELA3BP08861 270 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OPN1MW2P0DN77 364 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 OPN1MW3P0DN78 364 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 PSG2P11465 335 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 ORM2P19652 201 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 USF1P22415 310 aaPredicted RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 DGAT2L7PQ6IED9 249 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 LILRB1Q8NHL6 650 aaPredicted RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 INSIG2Q9Y5U4 225 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 PITX3O75364 302 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 GYPAP02724 150 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 FABP4P15090 132 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 GAMTQ14353 236 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 MYPOPQ86VE0 399 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 Q8NFD4 153 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM37Q8WXS4 190 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TRAV24A0A0B4J272 114 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 PGA5P0DJD9 388 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 NQO2P16083 231 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 DYNLT3P51808 116 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ERVS71-1P61550 626 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 LYZP61626 148 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 RPL31P62899 125 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 CXorf66Q5JRM2 361 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 H1FOOQ8IZA3 346 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR5R1Q8NH85 324 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 RASL11BQ9BPW5 248 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 CYTL1Q9NRR1 136 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TRAPPC1Q9Y5R8 145 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 Q1RN00 199 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF826PQ6ZT77 177 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 PRSS3P2Q8NHM4 247 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 LHFPL5Q8TAF8 219 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 BLNKQ8WV28 456 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ATP5SQ99766 215 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 NRIP2Q9BQI9 281 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TECRQ9NZ01 308 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TRBV6-6A0A0A6YYG2 114 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR2T8A6NH00 312 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 PHOX2AO14813 284 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 TM4SF5O14894 197 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF737O75373 536 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 CECR9P0C854 216 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 HTR1DP28221 377 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 SULT1A1P50225 295 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 AESQ08117 197 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 CCDC144NLQ6NUI1 221 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF788Q6ZQV5 615 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 LYRM2Q9NU23 88 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 DOK5Q9P104 306 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 PRNDQ9UKY0 176 aa6.74□□□□□ -1.33
HLA-DMB-262ENST00000498020 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF273Q14593 569 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 VAMP3Q15836 100 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 GUCA2BQ16661 112 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 C20orf204Q6ZNR8 217 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 IL17RELQ6ZVW7 336 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 PDPNQ86YL7 162 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR8I2Q8N0Y5 310 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 TCTEX1D1Q8N7M0 179 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 DTD1Q8TEA8 209 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 LSM10Q969L4 123 aaKnown RBP6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 GPR146Q96CH1 333 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGKV1D-13A0A0B4J2D9 117 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGKV1-13P0DP09 117 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 MUC1P15941 1255 aaPredicted RBP6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 PMCHP20382 165 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 SLC35E4Q6ICL7 350 aa6.73□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR1L1Q8NH94 360 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms