RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C9orf62Q8N4C0 152 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 OR4A5Q8NH83 315 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 QTRT1Q9BXR0 403 aaKnown RBP16.77■□□□□ 0.27
SND1-214ENST00000489417 HSPB7Q9UBY9 170 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 TNFSF18Q9UNG2 199 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 C15orf61A6NNL5 157 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 SSSCA1O60232 199 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 KBTBD11O94819 623 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 MOSP00540 346 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 SNRNP70P08621 437 aaKnown RBP16.76■□□□□ 0.27
SND1-214ENST00000489417 BRS3P32247 399 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 TNFRSF9Q07011 255 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 OR2T10Q8NGZ9 312 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 TMEM167AQ8TBQ9 72 aa16.76■□□□□ 0.27
SND1-214ENST00000489417 FOXA2Q9Y261 457 aaPredicted RBP16.76■□□□□ 0.27
SND1-214ENST00000489417 SETXQ7Z333 2677 aaKnown RBP16.76■□□□□ 0.27
SND1-214ENST00000489417 VPS13CQ709C8 3753 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 A0A0U1RQK1 487 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 E5RGE8 158 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 SYNGR2O43760 224 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 SLC25A17O43808 307 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 PVALBP20472 110 aaPredicted RBP16.75■□□□□ 0.27
SND1-214ENST00000489417 CNTFRP26992 372 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 EBI3Q14213 229 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 HES1Q14469 280 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 PSG5Q15238 335 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 LAMTOR1Q6IAA8 161 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 ZNF429Q86V71 674 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 TEX45Q8NA69 505 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 EAF1Q96JC9 268 aaPredicted RBP16.75■□□□□ 0.27
SND1-214ENST00000489417 RBKSQ9H477 322 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 C11orf1Q9H5F2 150 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 PRNDQ9UKY0 176 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■■■□□ 15.8
SND1-214ENST00000489417 ITPR2Q14571 2701 aa16.75■□□□□ 0.27
SND1-214ENST00000489417 L7N2F9 121 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 CHST1O43916 411 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 MED6O75586 246 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 SPDEFO95238 335 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 CXCL2P19875 107 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 CD24P25063 80 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 BPIFB3P59826 476 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 VAMP2P63027 116 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 LGALSLQ3ZCW2 172 aaPredicted RBP16.74■□□□□ 0.27
SND1-214ENST00000489417 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 MFFQ9GZY8 342 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 TMEM14BQ9NUH8 114 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 CACFD1Q9UGQ2 172 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 HSPB11Q9Y547 144 aa16.74■□□□□ 0.27
SND1-214ENST00000489417 FSHBP01225 129 aa16.73■□□□□ 0.27
SND1-214ENST00000489417 HNF4GQ14541 408 aa16.73■□□□□ 0.27
SND1-214ENST00000489417 RAB40CQ96S21 281 aa16.73■□□□□ 0.27
SND1-214ENST00000489417 FAM96BQ9Y3D0 163 aa16.73■□□□□ 0.27
SND1-214ENST00000489417 KCNAB3O43448 404 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 IFNA17P01571 189 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 CRYGBP07316 175 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 FAM106CPP0CH98 169 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 NUP62P37198 522 aaPredicted RBP16.72■□□□□ 0.27
SND1-214ENST00000489417 SPCS3P61009 180 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 FAM120AOSQ5T036 256 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 ACOT7LQ6ZUV0 252 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 THNSL2Q86YJ6 484 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 Q8N6K4 173 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 INO80EQ8NBZ0 244 aaPredicted RBP16.72■□□□□ 0.27
SND1-214ENST00000489417 MEGF9Q9H1U4 602 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 TPSG1Q9NRR2 321 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 NUP50Q9UKX7 468 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 OR51B2Q9Y5P1 312 aa16.72■□□□□ 0.27
SND1-214ENST00000489417 MAP1AP78559 2803 aaPredicted RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 RNF222A6NCQ9 220 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 IAPPP10997 89 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 P2RY1P47900 373 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 RPL8P62917 257 aaKnown RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 MMDQ15546 238 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 PDLIM3Q53GG5 364 aaPredicted RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 FBLN7Q53RD9 439 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 NPBQ8NG41 125 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 NANPQ8TBE9 248 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 ZNF430Q9H8G1 570 aaPredicted RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 FKBP11Q9NYL4 201 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 METTL1Q9UBP6 276 aaKnown RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 TCF19Q9Y242 345 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 SIGLEC9Q9Y336 463 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 BOLA1Q9Y3E2 137 aa16.71■□□□□ 0.27
SND1-214ENST00000489417 SOX21Q9Y651 276 aaPredicted RBP16.71■□□□□ 0.27
SND1-214ENST00000489417 RRHO14718 337 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 NBR2O15453 112 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 GPR137BO60478 399 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 OR2F2O95006 317 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 TMEM50AO95807 157 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 FBP1P09467 338 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 TMEM11P17152 192 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 DYNLT3P51808 116 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 F2RL1P55085 397 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 PAX9P55771 341 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 HSPE1P61604 102 aaKnown RBP16.7■□□□□ 0.26
SND1-214ENST00000489417 OR2F1Q13607 317 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 SPINK9Q5DT21 86 aa16.7■□□□□ 0.26
SND1-214ENST00000489417 DTD1Q8TEA8 209 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms