RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ATP6V1DQ9Y5K8 247 aa0.84□□□□□ -2.27
R3HDM1-219ENST00000488035 IGHV1-18A0A0C4DH31 117 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 H0Y980 276 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 CETN3O15182 167 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 KLRC4O43908 158 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 YEATS4O95619 227 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 NAPSAO96009 420 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 RPS12P25398 132 aaKnown RBP0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 DDTP30046 118 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 MAGEA2P43356 314 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 TPI1P60174 286 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 RAB14P61106 215 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 RELAQ04206 551 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 MED21Q13503 144 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 SLC36A2Q495M3 483 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 C1orf195Q5TG92 126 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 FAM78BQ5VT40 261 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 LYZL1Q6UWQ5 148 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 HIST2H3AQ71DI3 136 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 KTN1-AS1Q86SY8 53 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 Q96M85 177 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 HSPB9Q9BQS6 159 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 OR8D2Q9GZM6 311 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 PRELID1Q9Y255 219 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 PXMP4Q9Y6I8 212 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 DISP1Q96F81 1524 aa0.83□□□□□ -2.28
R3HDM1-219ENST00000488035 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 MYOFQ9NZM1 2061 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 TRAV7A0A075B6U4 112 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 A0A0D9SEW6 157 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 A0A0J9YW62 118 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 IGKV2-29A2NJV5 120 aaPredicted RBP0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 C21orf140B9A014 251 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 TRAPPC2LH3BP13 241 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 H7C2G1 150 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 M0QZ92 97 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 SSNA1O43805 119 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 CIAO1O76071 339 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 PPBPP02775 128 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 LYNX1P0DP58 116 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 MAGEA12P43365 314 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 ACSM3Q53FZ2 586 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 SLC36A1Q7Z2H8 476 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 SLC22A24Q8N4F4 322 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 C9orf163Q8N9P6 203 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 DRC3Q9H069 523 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 HDHD2Q9H0R4 259 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 GPR84Q9NQS5 396 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 TIMM22Q9Y584 194 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 TIMM9Q9Y5J7 89 aa0.82□□□□□ -2.28
R3HDM1-219ENST00000488035 A0A0A6YYH2 397 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 TRAV38-1A0A0B4J264 116 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 A6NJ64 397 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 OR4C45A6NMZ5 311 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 I3L521 148 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 LEPROTO15243 131 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 DEXIO95424 95 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 TPM3P06753 285 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 GPX2P18283 190 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 TPM4P67936 248 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 MOGQ16653 247 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 CDKL4Q5MAI5 379 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 FAM201AQ5SY85 155 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 TMEM42Q69YG0 159 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 SFXN4Q6P4A7 337 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 LRRN1Q6UXK5 716 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 SSX8Q7RTT4 187 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 ZNF550Q7Z398 422 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 SLC51BQ86UW2 128 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 OR5B17Q8NGF7 314 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 OR2T4Q8NH00 348 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 JOSD2Q8TAC2 188 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 DDI1Q8WTU0 396 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 ACOT12Q8WYK0 555 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 RAB8BQ92930 207 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 TMA16Q96EY4 203 aaKnown RBP0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 XPNPEP1Q9NQW7 623 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 ABCC11Q96J66 1382 aa0.81□□□□□ -2.28
R3HDM1-219ENST00000488035 HMSDA8MTL9 139 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 INMT-MINDY4F8WBC2 141 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 CREBL2O60519 120 aaPredicted RBP0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 PSMB8P28062 276 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 HLA-DMBP28068 263 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 EVX1P49640 407 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 MAP3K7CLP57077 242 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 CLVS2Q5SYC1 327 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 FAM27BQ5VT28 67 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 C7orf65Q6ZTY9 151 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 GID4Q8IVV7 300 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 DEFB119Q8N690 84 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 C15orf53Q8NAA6 179 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 OR1M1Q8NGA1 313 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 PIGXQ8TBF5 258 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 SLC7A6Q92536 515 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 KLK6Q92876 244 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 TESCQ96BS2 214 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 DIRAS2Q96HU8 199 aa0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 NAA38Q9BRA0 125 aaKnown RBP0.8□□□□□ -2.28
R3HDM1-219ENST00000488035 DOHHQ9BU89 302 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms