RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 HLA-DRB1P01911 266 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 RWDD2BP57060 319 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 TAS2R30P59541 319 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 SNRPD2P62316 118 aaKnown RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 PSG4Q00888 419 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 TMEM42Q69YG0 159 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 OR13C8Q8NGS7 320 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 OR10X1Q8NGY0 326 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 CMSS1Q9BQ75 279 aaKnown RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 DOCK5Q9H7D0 1870 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 NMNAT1Q9HAN9 279 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 PRTFDC1Q9NRG1 225 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 MCTS1Q9ULC4 181 aaKnown RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 SAMHD1Q9Y3Z3 626 aaKnown RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 MTUS2Q5JR59 1369 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 ABCC12Q96J65 1359 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 ZNF878C9JN71 531 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 H3BPC8 53 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 OR7C1O76099 320 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 SRP19P09132 144 aaKnown RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 GZMBP10144 247 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 MAGEA12P43365 314 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 RPL5P46777 297 aaKnown RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 FXYD7P58549 80 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 TAS2R20P59543 309 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 VBP1P61758 197 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 RPL30P62888 115 aaKnown RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 TAF1AQ15573 450 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 GRK1Q15835 563 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 LIN52Q52LA3 116 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 SMARCD3Q6STE5 483 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 S100A7AQ86SG5 101 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 ANKRD29Q8N6D5 301 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 ZNF676Q8N7Q3 588 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 PXT1Q8NFP0 134 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 CLDND2Q8NHS1 167 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 KLK6Q92876 244 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 CAPZA3Q96KX2 299 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 CEP19Q96LK0 163 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 NMNAT3Q96T66 252 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 KIFC1Q9BW19 673 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 MRPL16Q9NX20 251 aaKnown RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 IDI2-AS1Q9NZ38 188 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 RSL24D1Q9UHA3 163 aaKnown RBP2.37□□□□□ -2.03
VPS13A-211ENST00000484581 HSPE1-MOB4S4R3N1 261 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 TTC21AQ8NDW8 1320 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 RALGAPA2Q2PPJ7 1873 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 SHANK3Q9BYB0 1731 aa2.37□□□□□ -2.03
VPS13A-211ENST00000484581 SDK2Q58EX2 2172 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 DOCK3Q8IZD9 2030 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 FAAHO00519 579 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 CD5P06127 495 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 ZNF705DP0CH99 300 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-211ENST00000484581 CD24P25063 80 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 RUNX1Q01196 453 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 KCNJ8Q15842 424 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 HACD4Q5VWC8 232 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 MSRB3Q8IXL7 192 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 OR8B12Q8NGG6 310 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 PHB2Q99623 299 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 AICDAQ9GZX7 198 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 ZNF391Q9UJN7 358 aa2.36□□□□□ -2.03
VPS13A-211ENST00000484581 NYNRINQ9P2P1 1898 aaKnown RBP2.36□□□□□ -2.03
VPS13A-211ENST00000484581 SIPA1L1O43166 1804 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TRAV26-2A0A0B4J265 109 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 FAM236DA0A1B0GTK5 79 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 A0A1W2PNN7 141 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 hADV38S2A0JD32 116 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TMEM235A6NFC5 223 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 E5RI56 91 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 PDE6DO43924 150 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 NPYP01303 97 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 IGKV1-17P01599 117 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 FAM236CP0DP71 79 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 CPMP14384 443 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 XCL1P47992 114 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 Q6ZS49 121 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 C2orf91Q6ZV80 131 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 SSX8Q7RTT4 187 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TBC1D19Q8N5T2 526 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 MCFD2Q8NI22 146 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 AP3S1Q92572 193 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TVP23CQ96ET8 276 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TSPAN32Q96QS1 320 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 COMMD5Q9GZQ3 224 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 XAGE1AQ9HD64 81 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 FAM215AQ9Y5M1 114 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 PCF11O94913 1555 aaKnown RBP2.35□□□□□ -2.03
VPS13A-211ENST00000484581 ZSWIM8A7E2V4 1837 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 PLXNB1O43157 2135 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 NUP155O75694 1391 aa2.35□□□□□ -2.03
VPS13A-211ENST00000484581 TRBV20OR9-2A0A075B6H5 130 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 IGKV1D-17A0A075B6S4 117 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms