RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 B4DSR2 109 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 C17orf112F2Z3M2 114 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 HNRNPA3P51991 378 aaKnown RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ACOT6Q3I5F7 207 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 SMIM8Q96KF7 97 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 TBX15Q96SF7 602 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF586Q9NXT0 402 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ARFGEF3Q5TH69 2177 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 LRRK1Q38SD2 2015 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ARL3P36405 182 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 RND3P61587 244 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 PAX5Q02548 391 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 BSXQ3C1V8 233 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 WDR31Q8NA23 367 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 OR10S1Q8NGN2 331 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 C14orf144Q96I85 54 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 ADTRPQ96IZ2 230 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 AURKAIP1Q9NWT8 199 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 UBE2L5PA0A1B0GUS4 154 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 CLPSP04118 112 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 MGST1P10620 155 aaKnown RBP8.99□□□□□ -0.97
TCOF1-204ENST00000427724 PTGDSP41222 190 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 NUP37Q8NFH4 326 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 OR52M1Q8NGK5 317 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 OR4S2Q8NH73 311 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 CLDN16Q9Y5I7 305 aa8.99□□□□□ -0.97
TCOF1-204ENST00000427724 SIAH2O43255 324 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 AGAP20933 346 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 DPPA3Q6W0C5 159 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 OR4C13Q8NGP0 309 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 MARS2Q96GW9 593 aaKnown RBP8.98□□□□□ -0.97
TCOF1-204ENST00000427724 CLEC7AQ9BXN2 247 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF835Q9Y2P0 537 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 KIF26AQ9ULI4 1882 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-204ENST00000427724 MAP1LC3B2A6NCE7 125 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 GLIPR1P48060 266 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 FAM78BQ5VT40 261 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 WBP1Q96G27 269 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 MAP1LC3BQ9GZQ8 125 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 RABAC1Q9UI14 185 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 H0Y8G0 127 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 IGHV2-70P01814 119 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 PMCHP20382 165 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 NPBWR2P48146 333 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 RBM11P57052 281 aaKnown RBP8.98□□□□□ -0.97
TCOF1-204ENST00000427724 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-204ENST00000427724 TMEM183BQ1AE95 376 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF788Q6ZQV5 615 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 MYPOPQ86VE0 399 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-204ENST00000427724 OR2T10Q8NGZ9 312 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 Q8WTZ3 238 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 SLC25A15Q9Y619 301 aa8.98□□□□□ -0.97
TCOF1-204ENST00000427724 A0A0A6YYD4 124 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 IGHV3-21A0A0B4J1V1 117 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 IGKV1-9A0A0C4DH69 117 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 A0A1W2PN81 502 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 TRDCB7Z8K6 153 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HSBP1L1C9JCN9 74 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 SPINK4O60575 86 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 TFPI2P48307 235 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 TPPP2P59282 170 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 NRGNQ92686 78 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 NPIPB13A6NJU9 1138 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 NPIPB4C9JG80 1138 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 GNG7O60262 68 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 CA11O75493 328 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 DANCRP0C864 163 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 LOXL3P58215 753 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 CXorf66Q5JRM2 361 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-204ENST00000427724 C12orf54Q6X4T0 127 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 OR1P1Q8NH06 330 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 RAB24Q969Q5 203 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 P2RX4Q99571 388 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 CALYQ9NYX4 217 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 KLF2Q9Y5W3 355 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 SCTP09683 121 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HTN1P15515 57 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BOP23527 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BBP33778 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BDP58876 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BCP62807 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST2H2BEQ16778 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 C11orf42Q8N5U0 333 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 ZIC4Q8N9L1 334 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BHQ93079 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 Q96M66 194 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BNQ99877 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H2BMQ99879 126 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 SLC25A22Q9H936 323 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms