RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 C5orf30Q96GV9 206 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 DPH3P1Q9H4G8 78 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 LCTP09848 1927 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 TRAV8-1A0A0A6YYK1 113 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 PEX7O00628 323 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 ASAH2BP0C7U1 165 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 TDGF1P13385 188 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 HMGA1P17096 107 aaKnown RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF585BQ52M93 769 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 CCL27Q9Y4X3 112 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 ADAMTSL1Q8N6G6 1762 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 OBSL1O75147 1896 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 PPIAL4DF5H284 164 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 THY1P04216 161 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 MRPL20Q9BYC9 149 aaKnown RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 MIXL1Q9H2W2 232 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 IGLV3-27P01718 113 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF688P0C7X2 276 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 SSBP3Q9BWW4 388 aaPredicted RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 C9JCJ5 164 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 FUT5Q11128 374 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 SF3B5Q9BWJ5 86 aaKnown RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 PRF1P14222 555 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 GPR183P32249 361 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 RND2P52198 227 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 MRPL32Q9BYC8 188 aaKnown RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TLNRD1Q9H1K6 362 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 G6PC2Q9NQR9 355 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 IGHV5-51A0A0C4DH38 117 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 PLNP26678 52 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 MAGEA5P43359 124 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TNFRSF9Q07011 255 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TMEM155Q4W5P6 130 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 FAM89BQ8N5H3 189 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TMEM30AQ9NV96 361 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 A0A0U1RQV5 110 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 HIST1H4AP62805 103 aaKnown RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TRA2AQ13595 282 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 VAX1Q5SQQ9 334 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 ORAOV1Q8WV07 137 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 PHF7Q9BWX1 381 aaPredicted RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 SDF2L1Q9HCN8 221 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 TRAV30A0A087WSZ9 112 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 FBLN7Q53RD9 439 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 PRSS41Q7RTY9 318 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF48Q96MX3 618 aaPredicted RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 H3BTX0 84 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 HOXD4P09016 255 aaPredicted RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 DANCRP0C864 163 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF660Q6AZW8 331 aaPredicted RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF257Q9Y2Q1 563 aa8.91□□□□□ -0.98
COL4A4-201ENST00000396625 VSIG8P0DPA2 414 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 CXCL16Q9H2A7 254 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 NPIPB4C9JG80 1138 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 RND3P61587 244 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF79Q15937 498 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 GUSBP11Q6P575 273 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 WDR82Q6UXN9 313 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 KCNE1BA0A087WTH5 132 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 NUTF2P61970 127 aaKnown RBP8.9□□□□□ -0.98
COL4A4-201ENST00000396625 PMS2CLQ68D20 193 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.98
COL4A4-201ENST00000396625 SPTY2D1-AS1A0A0U1RR47 76 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 ASIPP42127 132 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 DCTN5Q9BTE1 182 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 A0A1W2PP11 408 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 PRR32B1ATL7 298 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 C8orf88P0DMB2 117 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 FOXA3P55318 350 aaPredicted RBP8.9□□□□□ -0.98
COL4A4-201ENST00000396625 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 UNQ5815/PRO19632Q6UWF5 114 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 Q6ZNB5 142 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 FMC1Q96HJ9 113 aa8.9□□□□□ -0.98
COL4A4-201ENST00000396625 TMEM42Q69YG0 159 aa8.9□□□□□ -0.99
COL4A4-201ENST00000396625 C16orf47Q6ZP98 133 aaPredicted RBP8.9□□□□□ -0.99
COL4A4-201ENST00000396625 ADRA2AP08913 450 aa8.9□□□□□ -0.99
COL4A4-201ENST00000396625 C3AR1Q16581 482 aa8.9□□□□□ -0.99
COL4A4-201ENST00000396625 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.99
COL4A4-201ENST00000396625 YAE1D1Q9NRH1 226 aa8.9□□□□□ -0.99
COL4A4-201ENST00000396625 IGHV3-72A0A0B4J1Y9 119 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 PLA2G10O15496 165 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 CLEC2AQ6UVW9 174 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 MRPL52Q86TS9 123 aaKnown RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF488Q96MN9 340 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 LY75O60449 1722 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 LOC390937A0A1W2PQ73 354 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 LDLRAD1Q5T700 205 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 MSRB3Q8IXL7 192 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms