RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 EGLN1Q9GZT9 426 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SPRR3Q9UBC9 169 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TNRC18O15417 2968 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GATCO43716 136 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR9G9P0C7N8 305 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GNB2P62879 340 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SPSB4Q96A44 273 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 C14orf144Q96I85 54 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 DDA1Q9BW61 102 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PKIBQ9C010 78 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SEBOXQ9HB31 216 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TECTAO75443 2155 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 A0A087WWC5 75 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 A0A1W2PRD5 423 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 A0A1W2PRF3 423 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 A0A1W2PRM7 423 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IFITM10A6NMD0 228 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GZMHP20718 246 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 NPY1RP25929 384 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CRYBB3P26998 211 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PLGLAQ15195 96 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 MS4A5Q9H3V2 200 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ATRXP46100 2492 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TGOLN2O43493 480 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GNG4P50150 75 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 STUMQ69YW2 141 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNF497Q6ZNH5 498 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR1L6Q8NGR2 347 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CCL17Q92583 94 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNRD1Q9P1U0 126 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 WIPI2Q9Y4P8 454 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNF253O75346 499 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR4A8P0C604 315 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IL3RAP26951 378 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FOXF2Q12947 444 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FDCSPQ8NFU4 85 aa12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CECR9P0C854 216 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 NUBP1P53384 320 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SPATA31B1PQ5VZV4 182 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ITLN1Q8WWA0 313 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SCRT1Q9BWW7 348 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CGAP01215 116 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ORM2P19652 201 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SARAFQ96BY9 339 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZPBPQ9BS86 351 aa12.03□□□□□ -0.48
TNFRSF1B-201ENST00000376259 Q6P435 159 aa12.02□□□□□ -0.48
TNFRSF1B-201ENST00000376259 P2RX4Q99571 388 aa12.02□□□□□ -0.48
TNFRSF1B-201ENST00000376259 VAMP8Q9BV40 100 aa12.02□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TCTAP57738 103 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TRAT1Q6PIZ9 186 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MOB3BQ86TA1 216 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 LINC00470Q9BZP3 86 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CA1P00915 261 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CTAG1AP78358 180 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ODF3L1Q8IXM7 274 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ANAPC16Q96DE5 110 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF331Q9NQX6 463 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
TNFRSF1B-201ENST00000376259 REG1AP05451 166 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR10J1P30954 320 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OPRK1P41145 380 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RHOBP62745 196 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 COLCA1Q6ZS62 124 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 REC114Q7Z4M0 266 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 BOD1L1Q8NFC6 3051 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MLANAQ16655 118 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF664Q8N3J9 261 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 J3QR06 171 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 IGFBP2P18065 325 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 LINC00596Q86U02 117 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 BORCS7Q96B45 105 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR6C3Q9NZP0 311 aa12.01□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HELTA6NFD8 242 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TPPP2P59282 170 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TEPPQ6URK8 271 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF114Q8NC26 417 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 GMPPAQ96IJ6 420 aaPredicted RBP12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 COX5BP10606 129 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CD82P27701 267 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms