RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 ZNF146Q15072 292 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 SCARF2Q96GP6 870 aaPredicted RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 FREM3P0C091 2139 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 SEMA5BQ9P283 1151 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 C7orf66A4D0T2 115 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 LINC00862A6NCI5 91 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF345Q14585 488 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 PSME4Q14997 1843 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 GLI3P10071 1580 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 ASIPP42127 132 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 V9GYH0 126 aa11.18□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 C10orf111Q8N326 155 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 MOSP00540 346 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 CRYBB3P26998 211 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 TGFAP01135 160 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 PKIBQ9C010 78 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 S4R3C0 116 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 ALPK2Q86TB3 2170 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 VAX1Q5SQQ9 334 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 SPSB4Q96A44 273 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 GPHA2Q96T91 129 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 FDCSPQ8NFU4 85 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 SDF2L1Q9HCN8 221 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 OR5AC2Q9NZP5 309 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 NPBWR2P48146 333 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 C7orf69Q9H7B7 122 aa11.17□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF506Q5JVG8 444 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 TRAF4Q9BUZ4 470 aaPredicted RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 TUBD1Q9UJT1 453 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 SPTBN2O15020 2390 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 C21orf62-AS1Q17RA5 79 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 WDR82Q6UXN9 313 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 UBR3Q6ZT12 1888 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 BIVMQ86UB2 503 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 LNP1A1A4G5 178 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 ZG16O60844 167 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 C9orf62Q8N4C0 152 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 SRIP30626 198 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 F12P00748 615 aaPredicted RBP11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 CRPP02741 224 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 NGFRP08138 427 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
SLC44A1-202ENST00000374723 SAPCD1Q5SSQ6 148 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SELENOHQ8IZQ5 122 aaKnown RBP11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 COX6A1P12074 109 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 NPIPB3Q92617 1050 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 GLIPR1P48060 266 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 ICAM4Q14773 271 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 OR10S1Q8NGN2 331 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SAP25Q8TEE9 199 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 PHLDA1Q8WV24 401 aaPredicted RBP11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SDK2Q58EX2 2172 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 HSPB1P04792 205 aaKnown RBP11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SLC25A34Q6PIV7 304 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 FOXA2Q9Y261 457 aaPredicted RBP11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 BSPH1Q075Z2 132 aa11.15□□□□□ -0.62
SLC44A1-202ENST00000374723 SMIM13P0DJ93 91 aa11.15□□□□□ -0.63
SLC44A1-202ENST00000374723 SH3BGRL3Q9H299 93 aa11.15□□□□□ -0.63
SLC44A1-202ENST00000374723 FBXL7Q9UJT9 491 aa11.15□□□□□ -0.63
SLC44A1-202ENST00000374723 LOC101059948A0A1B0GTJ6 334 aa11.14□□□□□ -0.63
SLC44A1-202ENST00000374723 GPR183P32249 361 aa11.14□□□□□ -0.63
SLC44A1-202ENST00000374723 CENPVL1A0A0U1RR11 272 aa11.14□□□□□ -0.63
SLC44A1-202ENST00000374723 RRHO14718 337 aa11.14□□□□□ -0.63
SLC44A1-202ENST00000374723 KLK2P20151 261 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms