RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 HKR1P10072 659 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
SMC6-201ENST00000351948 ZNF137PP52743 207 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
SMC6-201ENST00000351948 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 HIGD1AQ9Y241 93 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 CFDP00746 253 aaPredicted RBP11.49□□□□□ -0.57
SMC6-201ENST00000351948 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 GATCO43716 136 aaKnown RBP11.49□□□□□ -0.57
SMC6-201ENST00000351948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
SMC6-201ENST00000351948 PRO3102Q9H379 93 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 SLC2A8Q9NY64 477 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 CEP350Q5VT06 3117 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 MOSP00540 346 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 GALR1P47211 349 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 NPIPB3Q92617 1050 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 RTBDNQ9BSG5 229 aaPredicted RBP11.49□□□□□ -0.57
SMC6-201ENST00000351948 PITPNC1Q9UKF7 332 aa11.49□□□□□ -0.57
SMC6-201ENST00000351948 PSPNO60542 156 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 UQCC3Q6UW78 93 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 NAT8BQ9UHF3 227 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 CTXND1A0A1B0GTU2 59 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 DPRXA6NFQ7 191 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 FHITP49789 147 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 PAXXQ9BUH6 204 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 ORM1P02763 201 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 SEC11BP0C7V7 166 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 TDGF1P13385 188 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 FABP4P15090 132 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 CA7P43166 264 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 UCP3P55916 312 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 TPPP2P59282 170 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 ZNF880Q6PDB4 577 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 OR2T10Q8NGZ9 312 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 LYRM2Q9NU23 88 aaPredicted RBP11.48□□□□□ -0.57
SMC6-201ENST00000351948 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
SMC6-201ENST00000351948 GUCA2BQ16661 112 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 TCTEX1D1Q8N7M0 179 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
SMC6-201ENST00000351948 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 ZP3P21754 424 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 ZNF345Q14585 488 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 BSXQ3C1V8 233 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 WDR61Q9GZS3 305 aaKnown RBP11.47□□□□□ -0.57
SMC6-201ENST00000351948 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
SMC6-201ENST00000351948 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
SMC6-201ENST00000351948 CENPVQ7Z7K6 275 aaPredicted RBP11.47□□□□□ -0.57
SMC6-201ENST00000351948 TAF15Q92804 592 aaKnown RBP eCLIP11.47□□□□□ -0.572e-7■□□□□ 10
SMC6-201ENST00000351948 CRIM1Q9NZV1 1036 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 AUP1Q9Y679 476 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 MED13Q9UHV7 2174 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 SLC35B1P78383 322 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 AWAT1Q58HT5 328 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 ST6GALNAC3Q8NDV1 305 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 OR5AU1Q8NGC0 362 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
SMC6-201ENST00000351948 RNF2Q99496 336 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 VAX2Q9UIW0 290 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 CLDN34H7C241 214 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 ZP1P60852 638 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
SMC6-201ENST00000351948 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 ZNF207O43670 478 aaKnown RBP11.46□□□□□ -0.57
SMC6-201ENST00000351948 EGR1P18146 543 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 ZNF660Q6AZW8 331 aaPredicted RBP11.46□□□□□ -0.57
SMC6-201ENST00000351948 DNAH12Q6ZR08 3092 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 C20orf202A1L168 122 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
SMC6-201ENST00000351948 CXorf1O96002 111 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 CA2P00918 260 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
SMC6-201ENST00000351948 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.58
SMC6-201ENST00000351948 DNM1P46Q6ZS02 220 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 SRD5A3Q9H8P0 318 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 MANBALQ9NQG1 85 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 TRAPPC1Q9Y5R8 145 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 TMEM218A2RU14 115 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 TM4SF5O14894 197 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 RGS13O14921 159 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 RAMP3O60896 148 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 COL8A1P27658 744 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 NTF4P34130 210 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.58
SMC6-201ENST00000351948 HELTA6NFD8 242 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 ZNF497Q6ZNH5 498 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 A0A0B4J293 547 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms