RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TCAPO15273 167 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 PITX3O75364 302 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 PLAUP00749 431 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 TIMP3P35625 211 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 PKIAP61925 76 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 TLE4Q04727 773 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 C21orf62-AS1Q17RA5 79 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 REC114Q7Z4M0 266 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 MGST3O14880 152 aa11.52□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF737O75373 536 aa11.52□□□□□ -0.56
TRIM4-201ENST00000349062 MSMO1Q15800 293 aa11.52□□□□□ -0.56
TRIM4-201ENST00000349062 SAP30LQ9HAJ7 183 aa11.52□□□□□ -0.56
TRIM4-201ENST00000349062 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.56
TRIM4-201ENST00000349062 APELAP0DMC3 54 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF295-AS1Q8N0V1 137 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 RPRMQ9NS64 109 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 KIAA1456Q9P272 454 aa11.52□□□□□ -0.57
TRIM4-201ENST00000349062 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 CLDN34H7C241 214 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 C1QL4Q86Z23 238 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 MRPL41Q8IXM3 137 aaKnown RBP11.51□□□□□ -0.57
TRIM4-201ENST00000349062 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 HIST1H2BLQ99880 126 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 MYO18BQ8IUG5 2567 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 MORN2Q502X0 79 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 PKD1L2Q7Z442 2459 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 OR9G9P0C7N8 305 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 S1PR3Q99500 378 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 ARV1Q9H2C2 271 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.51□□□□□ -0.57
TRIM4-201ENST00000349062 TANC2Q9HCD6 1990 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
TRIM4-201ENST00000349062 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
TRIM4-201ENST00000349062 HBG1P69891 147 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 HBG2P69892 147 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRIM4-201ENST00000349062 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 IFNL4K9M1U5 179 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 PROP1O75360 226 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 GZMHP20718 246 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 LMO1P25800 156 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 ERVK-16P61578 105 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 TFF3Q07654 80 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 LY6DQ14210 128 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
TRIM4-201ENST00000349062 XKRY2A2RUG3 117 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 IGHV3-48P01763 117 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 FGF7P21781 194 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 ADIPOQQ15848 244 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 BATFQ16520 125 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 IGF2-ASQ6U949 168 aa11.5□□□□□ -0.57
TRIM4-201ENST00000349062 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 CCL21O00585 134 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 DFFBO76075 338 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 THBDP07204 575 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 TAS2R60P59551 318 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 MRPS11P82912 194 aaKnown RBP11.49□□□□□ -0.57
TRIM4-201ENST00000349062 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 CLDND2Q8NHS1 167 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 TMEM204Q9BSN7 226 aa11.49□□□□□ -0.57
TRIM4-201ENST00000349062 C15orf65H3BRN8 121 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 GCSAMLQ5JQS6 135 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 OR10P1Q8NGE3 313 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 IGFBPL1Q8WX77 278 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 GNPNAT1Q96EK6 184 aaPredicted RBP11.48□□□□□ -0.57
TRIM4-201ENST00000349062 TAS2R30P59541 319 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
TRIM4-201ENST00000349062 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 CT45A1Q5HYN5 189 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
TRIM4-201ENST00000349062 CT45A3Q8NHU0 189 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.575e-7■■■□□ 18.8
TRIM4-201ENST00000349062 UBE2G2P60604 165 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 SSX7Q7RTT5 188 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF664Q8N3J9 261 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF525Q8N782 197 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 AGMATQ9BSE5 352 aa11.48□□□□□ -0.57
TRIM4-201ENST00000349062 PATZ1Q9HBE1 687 aaKnown RBP11.48□□□□□ -0.57
TRIM4-201ENST00000349062 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 HBE1P02100 147 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 DUTP33316 252 aaKnown RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 TDGF1P3P51864 188 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 RBPJQ06330 500 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms