RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 MYBPHQ13203 477 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 MBD3L2Q8NHZ7 208 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 C20orf78Q9BR46 151 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 DEC1Q9P2X7 70 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 ZC3H12DA2A288 527 aaKnown RBP7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM90A8PA6NJQ4 464 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 LOC730098B7Z3J9 87 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 NDUFB4O95168 129 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 B3GALT4O96024 378 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM90A13PP0C7W8 464 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM90A24PP0C7X0 464 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 PTHLHP12272 177 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 TIAL1Q01085 375 aaKnown RBP eCLIP7.54□□□□□ -1.26e-11■■□□□ 14.5
CTDSPL-201ENST00000273179 DUSP5Q16690 384 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 TXNDC8Q6A555 127 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 LAIR2Q6ISS4 152 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 SLC25A42Q86VD7 318 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 KLHDC9Q8NEP7 349 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 RAXQ9Y2V3 346 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 A0A096LPE4 126 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 GPX3P22352 226 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 C9JQL5 133 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 SOD1P00441 154 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 TRAPPC6BQ86SZ2 158 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 TEX45Q8NA69 505 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 SGMS2Q8NHU3 365 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 ZNF286AQ9HBT8 521 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 TIAF1O95411 115 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 CA7P43166 264 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 KLF9Q13886 244 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 ZNF584Q8IVC4 421 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 IKZF5Q9H5V7 419 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 REV3LO60673 3130 aa7.53□□□□□ -1.2
CTDSPL-201ENST00000273179 USP17L23D6RBM5 183 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 CCL16O15467 120 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 SPANXN4Q5MJ08 99 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 CLDN19Q8N6F1 224 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 KIR3DL3Q8N743 410 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 NEUROG1Q92886 237 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 KLK11Q9UBX7 282 aa7.52□□□□□ -1.2
CTDSPL-201ENST00000273179 TRAV13-1A0A0B4J241 112 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 A8MWV9 139 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 NDUFA7O95182 113 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 GYPAP02724 150 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 PFN2P35080 140 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 SRSF9Q13242 221 aaKnown RBP eCLIP7.52□□□□□ -1.217e-6■■■■□ 19.5
CTDSPL-201ENST00000273179 FAM219BQ5XKK7 198 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 Q6ZWC4 215 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF740Q8NDX6 193 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 APOOQ9BUR5 198 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A1W2PPV9 198 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 PLPP2O43688 288 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 PIPP12273 146 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 MEOX1P50221 254 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM50BP56557 158 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 ERVK-16P61578 105 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF750Q32MQ0 723 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 ENTPD8Q5MY95 495 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 MRPL30Q8TCC3 161 aaKnown RBP7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 RASL10BQ96S79 203 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 VGLL1Q99990 258 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 SIGLEC8Q9NYZ4 499 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 A1L4Q6 167 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 TEX36Q5VZQ5 186 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 PLPP4Q5VZY2 271 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 DCBLD2Q96PD2 775 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 S1PR3Q99500 378 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 OR1A2Q9Y585 309 aa7.52□□□□□ -1.21
CTDSPL-201ENST00000273179 H3BTX0 84 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 GABRG2P18507 467 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 TESK1Q15569 626 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 HLA-DQA1Q5Y7H0 255 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 TPRX1Q8N7U7 411 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 SCN4AP35499 1836 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 TRAV18A0A075B6X5 111 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A0B4J2E0 115 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A1B0GX12 115 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 CHEK1O14757 476 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 C1QAP02745 245 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 ZFP36L2P47974 494 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 HBG2P69892 147 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF658BQ4V348 819 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM179BQ7Z7N9 219 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 KLF16Q9BXK1 252 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF665Q9H7R5 613 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms