RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RSU1Q15404 277 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 KISS1Q15726 138 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 SSX1Q16384 188 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 DEFB135Q30KP9 77 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ANKRD55Q3KP44 614 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 CT45A1Q5HYN5 189 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 OR2G6Q5TZ20 316 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 LIPKQ5VXJ0 399 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ELP2Q6IA86 826 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 GVQW1Q8N7I0 195 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 SUMF2Q8NBJ7 301 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ZNF439Q8NDP4 499 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 BVESQ8NE79 360 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 OR52B4Q8NGK2 314 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 OR13C3Q8NGS6 347 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 CT45A3Q8NHU0 189 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 DYNC2LI1Q8TCX1 351 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 S100ZQ8WXG8 99 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ACOT12Q8WYK0 555 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 GHSRQ92847 366 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 SNAPC3Q92966 411 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 FGGYQ96C11 551 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 USMG5Q96IX5 58 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 RITA1Q96K30 269 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 C4orf36Q96KX1 117 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 TBX5Q99593 518 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 NXF2Q9GZY0 626 aaKnown RBP4.41□□□□□ -1.7
SMG6-219ENST00000575663 MBNL3Q9NUK0 354 aaKnown RBP4.41□□□□□ -1.7
SMG6-219ENST00000575663 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
SMG6-219ENST00000575663 FBXL17Q9UF56 701 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 OR5H14A6NHG9 310 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PDCD5O14737 125 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 GPX5O75715 221 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 HTR3BO95264 441 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 CA2P00918 260 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 CD2P06729 351 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 UCHL1P09936 223 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 GADD45AP24522 165 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 KIR2DS2P43631 304 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 FHITP49789 147 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 MECP2P51608 486 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 ZNF134P52741 427 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 CEBPGP53567 150 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 ALKBH1Q13686 389 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 DEFB114Q30KQ6 69 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PIGYQ3MUY2 71 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 Q499Y3 187 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 FAM71F2Q6NXP2 309 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ZNF343Q6P1L6 599 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 TRAT1Q6PIZ9 186 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ZNF562Q6V9R5 426 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 LINC00596Q86U02 117 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PXT1Q8NFP0 134 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 OR2G2Q8NGZ5 317 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 OR5AK2Q8NH90 309 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 GPR148Q8TDV2 347 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 DTD1Q8TEA8 209 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 CCDC107Q8WV48 283 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 SLC25A46Q96AG3 418 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 MRPS24Q96EL2 167 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 WDR89Q96FK6 387 aaPredicted RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 PGLYRP3Q96LB9 341 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 CLCC1Q96S66 551 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 GPER1Q99527 375 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 SEC22CQ9BRL7 303 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 DCSTAMPQ9H295 470 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ISG20L2Q9H9L3 353 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 TXNL4BQ9NX01 149 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 METTL1Q9UBP6 276 aaKnown RBP4.4□□□□□ -1.71
SMG6-219ENST00000575663 FBXL7Q9UJT9 491 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 GNG8Q9UK08 70 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 JPT1Q9UK76 154 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ADAM30Q9UKF2 790 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 TRAPPC2LQ9UL33 140 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ING4Q9UNL4 249 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 ST3GAL6Q9Y274 331 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PRELID3BQ9Y3B1 194 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PEX16Q9Y5Y5 336 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 PKD1P98161 4303 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 KIAA2026Q5HYC2 2103 aa4.4□□□□□ -1.71
SMG6-219ENST00000575663 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 KIR2DL5BA0A0G2JN68 375 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 KIR2DL5BA0A0G2JPC4 375 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 TRBV5-5A0A0J9YX44 114 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 OR4C45A6NMZ5 311 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 FAM25AB3EWG3 89 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 FAM25CB3EWG5 89 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 FAM25GB3EWG6 89 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 IGLL5B9A064 214 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 GABRPO00591 440 aa4.39□□□□□ -1.71
SMG6-219ENST00000575663 NDUFS6O75380 124 aaKnown RBP4.39□□□□□ -1.71
SMG6-219ENST00000575663 TUSC2O75896 110 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms