RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 CGAP01215 116 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 APOC1P02654 83 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 CSN2P05814 226 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 CD7P09564 240 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SMIM10L2AP0DMW4 78 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SMIM10L2BP0DMW5 78 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 OGNP20774 298 aaKnown RBP3.7□□□□□ -1.82
PRKDC-209ENST00000540819 PDGFRLQ15198 375 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 IL17AQ16552 155 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 C15orf32Q32M92 178 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 TIFABQ6ZNK6 161 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 FER1L6-AS1Q8NA97 138 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 OR10G2Q8NGC3 310 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 MRPL30Q8TCC3 161 aaKnown RBP3.7□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF721Q8TF20 911 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 THEM6Q8WUY1 208 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SLC7A6Q92536 515 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 CMBLQ96DG6 245 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 RMI2Q96E14 147 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 FOPNLQ96NB1 174 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SEC22CQ9BRL7 303 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 DOHHQ9BU89 302 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 IFI27L2Q9H2X8 130 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 PDFQ9HBH1 243 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 FBXL12Q9NXK8 326 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 ABCC12Q96J65 1359 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 CEP170Q5SW79 1584 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SOGA1O94964 1423 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 DSCAML1Q8TD84 2053 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 A0A087WX48 190 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM269A0A1B0GVZ9 245 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 FAM168BA1KXE4 195 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 K7EP13 123 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 FAM107AO95990 144 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 COX4I1P13073 169 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 ATP5G3P48201 142 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 CMC4P56277 68 aaPredicted RBP3.69□□□□□ -1.82
PRKDC-209ENST00000540819 FGF12P61328 243 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 TNFAIP8L3Q5GJ75 292 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 ZFP1Q6P2D0 407 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 Q6Q795 121 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 NTM-AS1Q6ZSK4 140 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 NUP35Q8NFH5 326 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 SGMS2Q8NHU3 365 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 MAL2Q969L2 176 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 L3HYPDHQ96EM0 354 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 IGF2BP2-AS1Q96M15 143 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 ERMAPQ96PL5 475 aaPredicted RBP3.69□□□□□ -1.82
PRKDC-209ENST00000540819 WDR61Q9GZS3 305 aaKnown RBP3.69□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM126AQ9H061 195 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF286AQ9HBT8 521 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 TVP23BQ9NYZ1 205 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 MED11Q9P086 117 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 COPZ2Q9P299 210 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 LAMTOR3Q9UHA4 124 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 CSAG2Q9Y5P2 127 aa3.69□□□□□ -1.82
PRKDC-209ENST00000540819 ROCK2O75116 1388 aaKnown RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ANKRD12Q6UB98 2062 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 TRBV20OR9-2A0A075B6H5 130 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 IGHV3-43A0A0B4J1X8 118 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 A0A0J9YY10 115 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 A0A1B0GX51 115 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 A0A1B0GX78 115 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 A0A1W2PP18 115 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 IZUMO1RA6ND01 250 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF98A6NK75 572 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 DBIP07108 87 aaKnown RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF823P16415 610 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 PPP1CCP36873 323 aaKnown RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 BAMBIQ13145 260 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 LTC4SQ16873 150 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 KRTAP24-1Q3LI83 254 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF678Q5SXM1 525 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 WDR59Q6PJI9 974 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 AGTRAPQ6RW13 159 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 LRRC28Q86X40 367 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 EXOC3-AS1Q8N2X6 119 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF283Q8N7M2 679 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 OR9A2Q8NGT5 310 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 OR5W2Q8NH69 310 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 OR4A5Q8NH83 315 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 SLC25A40Q8TBP6 338 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 RAB2BQ8WUD1 216 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 DNAJC9Q8WXX5 260 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 OR5P3Q8WZ94 311 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 PHYHIPLQ96FC7 376 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 NARS2Q96I59 477 aaKnown RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNRD1Q9P1U0 126 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 CYSLTR1Q9Y271 337 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 RALGAPA2Q2PPJ7 1873 aa3.68□□□□□ -1.82
PRKDC-209ENST00000540819 ZNF106Q9H2Y7 1883 aaKnown RBP3.68□□□□□ -1.82
PRKDC-209ENST00000540819 XIRP1Q702N8 1843 aaKnown RBP3.67□□□□□ -1.82
PRKDC-209ENST00000540819 NEO1Q92859 1461 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 ARHGAP23Q9P227 1491 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 A6NDX4 124 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 OR5H14A6NHG9 310 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 J3KT08 172 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms