RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CPSF4LA6NMK7 179 aaKnown RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 RIIAD1A6NNX1 92 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 C4orf51C9J302 202 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 SSNA1O43805 119 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 CREBL2O60519 120 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 GMDSO60547 372 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 IGF2P01344 180 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 HIST1H1TP22492 207 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 NFYAP23511 347 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 SSR2P43308 183 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 SRP9P49458 86 aaKnown RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 GDI2P50395 445 aaKnown RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 UBE2E1P51965 193 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ATP5J2P56134 94 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 LOXL1Q08397 574 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 HTR4Q13639 388 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ZNF345Q14585 488 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ACSM3Q53FZ2 586 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 PABPC1L2AQ5JQF8 200 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 CLEC12AQ5QGZ9 265 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ZNF684Q5T5D7 378 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 FAM27D1Q5T7N8 215 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 TMEM215Q68D42 235 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ZNF660Q6AZW8 331 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 SLC35D2Q76EJ3 337 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 SLC36A1Q7Z2H8 476 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 OR2W3Q7Z3T1 314 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 DEFB123Q8N688 67 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 OR2L8Q8NGY9 312 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 OR2T27Q8NH04 317 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 OR5J2Q8NH18 312 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 OR1S1Q8NH92 325 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 CACNG8Q8WXS5 425 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 MS4A6EQ96DS6 147 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 MRPS24Q96EL2 167 aaKnown RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 UBE2E2Q96LR5 201 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 TEAD3Q99594 435 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 SAMD10Q9BYL1 202 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 CHRNA10Q9GZZ6 450 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
SKP1-213ENST00000524288 IFT46Q9NQC8 304 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 CA10Q9NS85 328 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 MED11Q9P086 117 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 ZNRD1Q9P1U0 126 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 DOCK9Q9BZ29 2069 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 KIAA0100Q14667 2235 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 EXPH5Q8NEV8 1989 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 HEATR5AQ86XA9 2040 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 DOCK8Q8NF50 2099 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 IGHV1OR15-9A0A0B4J2B8 117 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 A0A0B4J2E0 115 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 A0A1B0GTI1 187 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 A0A1B0GX12 115 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 PQLC2LA1A4F0 135 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 RFPL4AA6NLU0 287 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 IFITM5A6NNB3 132 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 D6RAR5 112 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 RFPL4AL1F8VTS6 287 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 NDUFS8O00217 210 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 CTNSO60931 367 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 MED6O75586 246 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 POP7O75817 140 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 GLSO94925 669 aaPredicted RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 GCGP01275 180 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 IFNGP01579 166 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 CD8AP01732 235 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 APCSP02743 223 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 DBIP07108 87 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 CISD3P0C7P0 127 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 SLC25A4P12235 298 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 ZNF3P17036 446 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 GFERP55789 205 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 OR12D2P58182 307 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 RAB8AP61006 207 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 PRDX1Q06830 199 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 NDUFAF6Q330K2 333 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 LINC00303Q3SY05 128 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 C10orf91Q5T1B1 145 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 LPCAT3Q6P1A2 487 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 LRRN1Q6UXK5 716 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 SSX6Q7RTT6 188 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 OLIG3Q7RTU3 272 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 TMEM25Q86YD3 366 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 ZNF695Q8IW36 515 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 PDZD9Q8IXQ8 264 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 NT5CQ8TCD5 201 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 TMEM239Q8WW34 195 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 GHSRQ92847 366 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 KLK6Q92876 244 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 CDS1Q92903 461 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 FAM131CQ96AQ9 280 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 DERL3Q96Q80 235 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 GPX7Q96SL4 187 aaPredicted RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 STACQ99469 402 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 SEC22CQ9BRL7 303 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 TIMM29Q9BSF4 260 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 GGTLC1Q9BX51 225 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 RERGLQ9H628 205 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 KIR3DX1Q9H7L2 352 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms