RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, human

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-222	ENST00000508579	VGLL4	Q14135	290 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	ZNF506	Q5JVG8	444 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	BCDIN3D	Q7Z5W3	292 aa	Known RBP	6.99	□□□□□ -1.29
CAST-222	ENST00000508579	C1orf158	Q8N1D5	194 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	OR4K13	Q8NH42	304 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	IL17D	Q8TAD2	202 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	FAM173A	Q9BQD7	235 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	CHST6	Q9GZX3	395 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	CST11	Q9H112	138 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	MPC1	Q9Y5U8	109 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	SIRT4	Q9Y6E7	314 aa	Predicted RBP	6.99	□□□□□ -1.29
CAST-222	ENST00000508579	LTBP4	Q8N2S1	1624 aa		6.99	□□□□□ -1.29
CAST-222	ENST00000508579	SSC5D	A1L4H1	1573 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	TMED7-TICAM2	A0A0A6YYA0	188 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	FAM236D	A0A1B0GTK5	79 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	TSPAN11	A1L157	253 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	C15orf61	A6NNL5	157 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	PRSS46	E5RG02	174 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	PITX3	O75364	302 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	DPM2	O94777	84 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	SLC2A10	O95528	541 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	NCR2	O95944	276 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	CELA3B	P08861	270 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	FAM236C	P0DP71	79 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	MORN3	Q6PF18	240 aa	Predicted RBP	6.98	□□□□□ -1.29
CAST-222	ENST00000508579	SLC25A42	Q86VD7	318 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	ATOH7	Q8N100	152 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	OR2T10	Q8NGZ9	312 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	RBMXL1	Q96E39	390 aa	Known RBP	6.98	□□□□□ -1.29
CAST-222	ENST00000508579	C5orf66	Q9H5L9	145 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	TECR	Q9NZ01	308 aa	Known RBP	6.98	□□□□□ -1.29
CAST-222	ENST00000508579	FIS1	Q9Y3D6	152 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	PXMP4	Q9Y6I8	212 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	ZNF646	O15015	1829 aa	Predicted RBP	6.98	□□□□□ -1.29
CAST-222	ENST00000508579	TRPM7	Q96QT4	1865 aa		6.98	□□□□□ -1.29
CAST-222	ENST00000508579	LILRA5	A6NI73	299 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	LILRA1	O75019	489 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SNCG	O76070	127 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	MT-ND6	P03923	174 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	LGALS1	P09382	135 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SP9	P0CG40	484 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	CPM	P14384	443 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GABRG2	P18507	467 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	NTF4	P34130	210 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	MAGEA5	P43359	124 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	PPIC	P45877	212 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	DLX1	P56177	255 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	HERVK_113	P63121	156 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	CSRP2	Q16527	193 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	DMRTC1	Q5HYR2	192 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SLC25A30	Q5SVS4	291 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	AMTN	Q6UX39	209 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ANKRD37	Q7Z713	158 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	AMIGO3	Q86WK7	504 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	TMEM256	Q8N2U0	113 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	CYB561D1	Q8N8Q1	229 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	OR4X2	Q8NGF9	303 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	PLPPR2	Q96GM1	343 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	FGF20	Q9NP95	211 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	WRAP73	Q9P2S5	460 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	MTFP1	Q9UDX5	166 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	FBXL7	Q9UJT9	491 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	MRPS17	Q9Y2R5	130 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	CSAG2	Q9Y5P2	127 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	HELZ	P42694	1942 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	COL2A1	P02458	1487 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	NRAP	Q86VF7	1730 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ARID2	Q68CP9	1835 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579		A0A096LPE4	126 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579		A0A1W2PPZ6	126 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ZC3H12D	A2A288	527 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	EEF1E1-BLOC1S5	C9J1V9	151 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579		H0YL77	283 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	NAPSA	O96009	420 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SLC25A5	P05141	298 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GRP	P07492	148 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SBK3	P0C264	359 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GATA1	P15976	413 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	IGFBP3	P17936	291 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	WT1	P19544	449 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GPR183	P32249	361 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	PRSS3	P35030	304 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ACVRL1	P37023	503 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	OPRK1	P41145	380 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GALR1	P47211	349 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	RPS24	P62847	133 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GGTLC2	Q14390	218 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ATXN7L3	Q14CW9	347 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	IGFBP7	Q16270	282 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SERTAD4-AS1	Q5TG53	156 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579		Q5XG85	94 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SLC35E4	Q6ICL7	350 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ZNF322	Q6U7Q0	402 aa	Predicted RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	ADAMTSL4	Q6UY14	1074 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	SSX8	Q7RTT4	187 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	TRPT1	Q86TN4	253 aa	Known RBP	6.97	□□□□□ -1.29
CAST-222	ENST00000508579	GJC3	Q8NFK1	279 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	OR51H1	Q8NH63	302 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	NEURL3	Q96EH8	262 aa		6.97	□□□□□ -1.29
CAST-222	ENST00000508579	WDYHV1	Q96HA8	205 aa		6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms