RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 C8orf88P0DMB2 117 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 CA5AP35218 305 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 IDH3GP51553 393 aaPredicted RBP1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 GLO1Q04760 184 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 HIST2H3AQ71DI3 136 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 TMEM156Q8N614 296 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 TMEM161BQ8NDZ6 487 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 OR8B12Q8NGG6 310 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 OR51T1Q8NGJ9 327 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 FKBP14Q9NWM8 211 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 USE1Q9NZ43 259 aa1.73□□□□□ -2.13
PRPF40A-208ENST00000472760 ABCC11Q96J66 1382 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 KIF15Q9NS87 1388 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 EIF4G1Q04637 1599 aaKnown RBP1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 A0A1B0GW54 56 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 COX7A2LO14548 114 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 DEXIO95424 95 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 REG1AP05451 166 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 RPL12P30050 165 aaKnown RBP1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 MAGEA2P43356 314 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 SLC38A11Q08AI6 406 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 MIAQ16674 131 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 LRRC75BQ2VPJ9 315 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 ZNF791Q3KP31 576 aaPredicted RBP1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 OGFRL1Q5TC84 451 aaPredicted RBP1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 OR10K2Q6IF99 312 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 C5orf46Q6UWT4 87 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 C10orf126Q8N4M7 172 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 PIGXQ8TBF5 258 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 OR51I2Q9H344 312 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 ANAPC10Q9UM13 185 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 SLX4Q8IY92 1834 aa1.72□□□□□ -2.13
PRPF40A-208ENST00000472760 H0Y980 276 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 CXCR6O00574 342 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 SLC16A4O15374 487 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 PRB1P04280 392 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 EMP1P54849 157 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 AKR1C1Q04828 323 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 RSU1Q15404 277 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 LYZL1Q6UWQ5 148 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 LRRN1Q6UXK5 716 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 TMA16Q96EY4 203 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 CXorf21Q9HAI6 301 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 DOK5Q9P104 306 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 AMMECR1Q9Y4X0 333 aaPredicted RBP1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 TIMM9Q9Y5J7 89 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 RGS12O14924 1447 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 NUP160Q12769 1436 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 REREQ9P2R6 1566 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 ABCC12Q96J65 1359 aa1.71□□□□□ -2.14
PRPF40A-208ENST00000472760 TMEM269A0A1B0GVZ9 245 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 ZNF705FA8MVS1 300 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 DISC1C4P0D8 188 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 CREBL2O60519 120 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 PSMB8P28062 276 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 TPI1P60174 286 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 BATFQ16520 125 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 C1orf194Q5T5A4 169 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 ZNF705AQ6ZN79 300 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 UMODL1-AS1Q8N2C9 162 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 OR1L8Q8NGR8 309 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 IMMP2LQ96T52 175 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 SPZ1Q9BXG8 430 aa1.7□□□□□ -2.14
PRPF40A-208ENST00000472760 TRGV2A0A075B6R0 118 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 A0A0J9YW62 118 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 LRRN3E7EW58 273 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 MYL12AP19105 171 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 ALDH3A1P30838 453 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 RPL30P62888 115 aaKnown RBP1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 C1orf195Q5TG92 126 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 Q6ZRN7 208 aaPredicted RBP1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 COA5Q86WW8 74 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 ZNF563Q8TA94 476 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 SLC7A6Q92536 515 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 TESCQ96BS2 214 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 DOHHQ9BU89 302 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 GPR84Q9NQS5 396 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 C8orf4Q9NR00 106 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 C3orf18Q9UK00 162 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 PRELID1Q9Y255 219 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 COQ4Q9Y3A0 265 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 RBM7Q9Y580 266 aaKnown RBP1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 PXMP4Q9Y6I8 212 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 GBF1Q92538 1859 aa1.69□□□□□ -2.14
PRPF40A-208ENST00000472760 IGHV1-69-2A0A0G2JMI3 117 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 PGLYRP1O75594 196 aaPredicted RBP1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 RPS12P25398 132 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 HAAOP46952 286 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 TMEM42Q69YG0 159 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 SLC22A24Q8N4F4 322 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 TBC1D19Q8N5T2 526 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 ASB17Q8WXJ9 295 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 RAB8BQ92930 207 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 VCX3BQ9H321 246 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 AK3Q9UIJ7 227 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms