RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CD36P16671 472 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CPN2P22792 545 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SLC6A1P30531 599 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 OR12D2P58182 307 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SMIM11AP58511 58 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CDC42P60953 191 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 DSTNP60981 165 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 COPZ1P61923 177 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SNRPGP62308 76 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 REEP5Q00765 189 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FMODQ06828 376 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PRDX1Q06830 199 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C2orf80Q0P641 193 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KRR1Q13601 381 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TPBGQ13641 420 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GNA13Q14344 377 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PDGFRLQ15198 375 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ELOCQ15369 112 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 BCL2A1Q16548 175 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 LRRC26Q2I0M4 334 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF181Q2M3W8 571 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 RGS21Q2M5E4 152 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FBXL19-AS1Q494R0 122 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF404Q494X3 552 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CCSMST1Q4G0I0 132 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 DEFB134Q4QY38 66 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FAM104BQ5XKR9 115 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C12orf73Q69YU5 71 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SLC25A25Q6KCM7 469 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 MORN3Q6PF18 240 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C16orf87Q6PH81 154 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ASCL4Q6XD76 172 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FA2HQ7L5A8 372 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PAGE2Q7Z2X7 111 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CYP4Z2PQ8N1L4 340 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TBC1D19Q8N5T2 526 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CLDN22Q8N7P3 220 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GPR32P1Q8NGA4 272 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CLHC1Q8NHS4 586 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF675Q8TD23 568 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SKA2Q8WVK7 121 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 MAL2Q969L2 176 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ITFG2Q969R8 447 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TAMM41Q96BW9 452 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PPCDCQ96CD2 204 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZHX1-C8orf76Q96EF9 292 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TCEAL4Q96EI5 215 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 NIPSNAP1Q9BPW8 284 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 AIF1LQ9BQI0 150 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF649Q9BS31 505 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 COPS4Q9BT78 406 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 DCUN1D5Q9BTE7 237 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 MED18Q9BUE0 208 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TAPBPLQ9BX59 468 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 EBPLQ9BY08 206 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 DCSTAMPQ9H295 470 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 DSN1Q9H410 356 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C11orf49Q9H6J7 331 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 NMNAT1Q9HAN9 279 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SDHAF2Q9NX18 166 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CALML5Q9NZT1 146 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF492Q9P255 531 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SLC23A2Q9UGH3 650 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SCML1Q9UN30 329 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ANGPT4Q9Y264 503 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 LSM2Q9Y333 95 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SAMHD1Q9Y3Z3 626 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ASB4Q9Y574 426 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 INSIG2Q9Y5U4 225 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF780BQ9Y6R6 833 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 V9GYQ6 96 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KIAA1549Q9HCM3 1950 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CHD7Q9P2D1 2997 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 F5P12259 2224 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 COL27A1Q8IZC6 1860 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SEC16AO15027 2179 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 TNRC6BQ9UPQ9 1833 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 SPTBP11277 2137 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PI4KAP42356 2102 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 EML6Q6ZMW3 1958 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 CHD9Q3L8U1 2897 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 LAMA2P24043 3122 aaKnown RBP1.23□□□□□ -2.21
PTPRC-208ENST00000427110 MKI67P46013 3256 aaKnown RBP1.23□□□□□ -2.21
PTPRC-208ENST00000427110 TRDV1A0A1B0GX56 115 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 ANKRD20A5PA0PJZ0 165 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 C5orf58C9J3I9 102 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF670-ZNF695F2Z2N8 137 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 J3QRE1 110 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 J3QRK9 145 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF593O00488 134 aaPredicted RBP1.23□□□□□ -2.21
PTPRC-208ENST00000427110 ZW10O43264 779 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 AQP9O43315 295 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 GATCO43716 136 aaKnown RBP1.23□□□□□ -2.21
PTPRC-208ENST00000427110 OR5F1O95221 314 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 FADS2O95864 444 aaKnown RBP1.23□□□□□ -2.21
PTPRC-208ENST00000427110 EPPINO95925 133 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 OPN1SWP03999 348 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 RLN2P04090 185 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 APODP05090 189 aa1.23□□□□□ -2.21
PTPRC-208ENST00000427110 OR5AC1P0C628 307 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms