RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 LGI3Q8N145 548 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 CCDC71LQ8N9Z2 235 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 POC1AQ8NBT0 407 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 TMEM186Q96B77 213 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 ABHD14BQ96IU4 210 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 MT-CO2P00403 227 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 OR1S2Q8NGQ3 325 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 FBXL17Q9UF56 701 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 RCL1Q9Y2P8 373 aaKnown RBP9.06□□□□□ -0.96
NEDD9-201ENST00000379433 TNCP24821 2201 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 PDE6DO43924 150 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 CEACAM4O75871 244 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 KRASP01116 189 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 IAPPP10997 89 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 EGR1P18146 543 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 RPL29P47914 159 aaKnown RBP9.06□□□□□ -0.96
NEDD9-201ENST00000379433 PRSS54Q6PEW0 395 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 ITLN1Q8WWA0 313 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 ARL11Q969Q4 196 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 WFDC1Q9HC57 220 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 SLC25A15Q9Y619 301 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 A0A0G2JNJ9 132 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 FAM90A27PA6NNH2 459 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PPIHO43447 177 aaKnown RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PRH1P02810 166 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 COX5AP20674 150 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 FGFRL1Q8N441 504 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 NRIP2Q9BQI9 281 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 OR2D2Q9H210 308 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 KCNIP1Q9NZI2 227 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 Q9UFV3 132 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 IQCF6A8MYZ5 107 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 CGAP01215 116 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 UBA52P62987 128 aaKnown RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 MZT1Q08AG7 82 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 P2RY6Q15077 328 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 Q6P435 159 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PIK3IP1Q96FE7 263 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 FAM96BQ9Y3D0 163 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 OR10J4P0C629 311 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 TPT1P13693 172 aaKnown RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 NFYBP25208 207 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 HLA-DRB3P79483 266 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 TBR1Q16650 682 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 MSI2Q96DH6 328 aaKnown RBP9.05□□□□□ -0.96
NEDD9-201ENST00000379433 MEGF9Q9H1U4 602 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 CXXC4Q9H2H0 198 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 GNG12Q9UBI6 72 aa9.05□□□□□ -0.96
NEDD9-201ENST00000379433 PLXNB1O43157 2135 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 SLC25A4P12235 298 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 FGF7P21781 194 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 PDLIM4P50479 330 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 TLE1Q04724 770 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 PCSK4Q6UW60 755 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 PGLYRP1O75594 196 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 HKR1P10072 659 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 GUSBP1Q15486 140 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 DHRS7BQ6IAN0 325 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-201ENST00000379433 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 Q8NA96 180 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 OR13A1Q8NGR1 328 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 NEUROG1Q92886 237 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 AMDHD2Q9Y303 409 aa9.04□□□□□ -0.96
NEDD9-201ENST00000379433 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 CEACAM18A8MTB9 384 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 C12orf77C9JDV5 145 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-201ENST00000379433 C11orf53Q8IXP5 236 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 FAM57AQ8TBR7 257 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 SH3BGRL3Q9H299 93 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 MED9Q9NWA0 146 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 DSCAMO60469 2012 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 HBZP02008 142 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
NEDD9-201ENST00000379433 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-201ENST00000379433 TPTE2P1Q5T6R2 138 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 IGFL3Q6UXB1 125 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 SAXO1Q8IYX7 474 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 CCL17Q92583 94 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms