RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 STARD4Q96DR4 205 aa6.96□□□□□ -1.29
GARNL3-201ENST00000373386 DEFB126Q9BYW3 111 aa6.96□□□□□ -1.29
GARNL3-201ENST00000373386 NPFFR1Q9GZQ6 430 aa6.96□□□□□ -1.29
GARNL3-201ENST00000373386 FNDC4Q9H6D8 234 aaPredicted RBP6.96□□□□□ -1.29
GARNL3-201ENST00000373386 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.29
GARNL3-201ENST00000373386 VPS13AQ96RL7 3174 aa6.96□□□□□ -1.29
GARNL3-201ENST00000373386 IGHV1-45A0A0A0MS14 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 M0R1X1 148 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 HPNP05981 417 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 CD33P20138 364 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 CXCL12P48061 93 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 TCL1AP56279 114 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 TMEM78Q5T7P6 136 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 IMMP1LQ96LU5 166 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 DMDP11532 3685 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 MYO15AQ9UKN7 3530 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 BORCS7-ASMTA0A0B4J1R7 106 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 FABP5P3A8MUU1 101 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE7O76087 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 SEC11BP0C7V7 166 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE12FP0CL80 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE12GP0CL81 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE12IP0CL82 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 BLVRBP30043 206 aaPredicted RBP6.96□□□□□ -1.3
GARNL3-201ENST00000373386 RPL24P83731 157 aaKnown RBP6.96□□□□□ -1.3
GARNL3-201ENST00000373386 GAGE4Q13068 117 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 PSG5Q15238 335 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 NRN1LQ496H8 165 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 MIDNQ504T8 468 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 FAM162BQ5T6X4 162 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 FAM69BQ5VUD6 431 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 C16orf47Q6ZP98 133 aaPredicted RBP6.96□□□□□ -1.3
GARNL3-201ENST00000373386 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.3
GARNL3-201ENST00000373386 NIPSNAP3BQ9BS92 247 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 SCRT1Q9BWW7 348 aa6.96□□□□□ -1.3
GARNL3-201ENST00000373386 LAMA1P25391 3075 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 LRP5LA4QPB2 252 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 M0R2Z0 102 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 CD5LO43866 347 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 LIFP15018 202 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 PRTN3P24158 256 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FAM3BP58499 235 aaPredicted RBP6.95□□□□□ -1.3
GARNL3-201ENST00000373386 MZT1Q08AG7 82 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 SPEM2Q0P670 501 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 KISS1Q15726 138 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FAM27BQ5VT28 67 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 ZNF474Q6S9Z5 364 aaPredicted RBP6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FOXI2Q6ZQN5 318 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 SHISA6Q6ZSJ9 500 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 ASCL5Q7RTU5 278 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 DEFB123Q8N688 67 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 DNAJC30Q96LL9 226 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 KCNIP1Q9NZI2 227 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 ZNF581Q9P0T4 197 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 B4GALT7Q9UBV7 327 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 AK3Q9UIJ7 227 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 CYSLTR1Q9Y271 337 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 NSG2Q9Y328 171 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 KIAA1549Q9HCM3 1950 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 A0A0G2JLM5 398 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 CRYM-AS1A6NIL9 109 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 ORM1P02763 201 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 DANCRP0C864 163 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 EDN2P20800 178 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 THBS3P49746 956 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 CNN1P51911 297 aaKnown RBP6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FOXL1Q12952 345 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 LYSMD4Q5XG99 296 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FAM57BQ71RH2 274 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 FAM219AQ8IW50 185 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 OR13C6PQ8NH95 151 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 SLC25A40Q8TBP6 338 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 SPTSSAQ969W0 71 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 MBNL3Q9NUK0 354 aaKnown RBP6.95□□□□□ -1.3
GARNL3-201ENST00000373386 IL36GQ9NZH8 169 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 SIGLEC9Q9Y336 463 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 LSM5Q9Y4Y9 91 aaKnown RBP6.95□□□□□ -1.3
GARNL3-201ENST00000373386 RP1P56715 2156 aa6.95□□□□□ -1.3
GARNL3-201ENST00000373386 RER1O15258 196 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 MFAP5Q13361 173 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 GUSBP11Q6P575 273 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 LYZL4Q96KX0 146 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 K7EP34 96 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 NTN3O00634 580 aaPredicted RBP6.94□□□□□ -1.3
GARNL3-201ENST00000373386 GPR137BO60478 399 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 COX6A1P12074 109 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 CRYGSP22914 178 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 CENPVQ7Z7K6 275 aaPredicted RBP6.94□□□□□ -1.3
GARNL3-201ENST00000373386 ZNF439Q8NDP4 499 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 CMTM2Q8TAZ6 248 aa6.94□□□□□ -1.3
GARNL3-201ENST00000373386 ST6GALNAC6Q969X2 333 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms