RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 OR8B8Q15620 311 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 Q6ZSR3 168 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 NIT1Q86X76 327 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 OR4D5Q8NGN0 318 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 LOC400499M0QZD8 3231 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 SNURFLB1AK76 121 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 ACP1P24666 158 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 PPOXP50336 477 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 LHX2P50458 406 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 C1orf174Q8IYL3 243 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 SPIN2AQ99865 258 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 SPIN2BQ9BPZ2 258 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 MTCH1Q9NZJ7 389 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 SLC45A2Q9UMX9 530 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 GVINP1Q7Z2Y8 2422 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 TRAPPC2LH3BP13 241 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 TMEM222Q9H0R3 208 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 NRN1Q9NPD7 142 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 CACNA1GO43497 2377 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 USF3Q68DE3 2245 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 NDUFB4O95168 129 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 SP9P0CG40 484 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 PLGLB1Q02325 96 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 TMEM211Q6ICI0 200 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 VWA1Q6PCB0 445 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 C6orf15Q6UXA7 325 aaPredicted RBP7.91□□□□□ -1.14
SMG6-202ENST00000354901 ASCL4Q6XD76 172 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 ZNF439Q8NDP4 499 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 OR8G5Q8NG78 346 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 UHRF2Q96PU4 802 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 HSPB7Q9UBY9 170 aa7.91□□□□□ -1.14
SMG6-202ENST00000354901 TCTAP57738 103 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 MPV17L2Q567V2 206 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 ABHD17BQ5VST6 288 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 ZNF841Q6ZN19 808 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 C20orf204Q6ZNR8 217 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.9□□□□□ -1.14
SMG6-202ENST00000354901 MKXQ8IYA7 352 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 ZDHHC23Q8IYP9 409 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 TCTEX1D1Q8N7M0 179 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 OR52L2PQ8NGH6 319 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 BORCS7Q96B45 105 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 TP53TG3Q9ULZ0 132 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 PXMP4Q9Y6I8 212 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 SLC22A20A6NK97 555 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 DNPH1O43598 174 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 MGST1P10620 155 aaKnown RBP7.9□□□□□ -1.14
SMG6-202ENST00000354901 CD99P14209 185 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 PAFAH1B2P68402 229 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 LHFPL4Q7Z7J7 247 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 STPG3Q8N7X2 389 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 ZNF114Q8NC26 417 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 C1QTNF5Q9BXJ0 243 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 NAT8BQ9UHF3 227 aa7.9□□□□□ -1.14
SMG6-202ENST00000354901 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
SMG6-202ENST00000354901 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.15
SMG6-202ENST00000354901 C11orf94C9JXX5 98 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 OR7C2O60412 319 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 WDR1O75083 606 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 SYNGR4O95473 234 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 NUDT3O95989 172 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 MT-CO2P00403 227 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 HTD2P86397 168 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 KLHDC1Q8N7A1 406 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 WFDC12Q8WWY7 111 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 SARAFQ96BY9 339 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 ANAPC16Q96DE5 110 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 ARL2-SNX15V9GYD0 113 aa7.9□□□□□ -1.15
SMG6-202ENST00000354901 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 A0A1B0GV72 72 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 GAGE12BA1L429 117 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 SNAI2O43623 268 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 ZNF253O75346 499 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 RHBDL1O75783 438 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 NAPSAO96009 420 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 CA6P23280 308 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 SRP14P37108 136 aaKnown RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 MRPL52Q86TS9 123 aaKnown RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 LRTM2Q8N967 370 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 OR1N2Q8NGR9 330 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 ASPMQ8IZT6 3477 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 TRAV30A0A087WSZ9 112 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 YPEL1O60688 119 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 SERPINE2P07093 398 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 ATP5G3P48201 142 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 UBE2NP61088 152 aaKnown RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 RPL15P61313 204 aaKnown RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 ARL16Q0P5N6 197 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 HLA-DRB5Q30154 266 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 SMIM21Q3B7S5 101 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 OR2M7Q8NG81 312 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 NEIL1Q96FI4 390 aaPredicted RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 YPEL2Q96QA6 119 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
SMG6-202ENST00000354901 IL36GQ9NZH8 169 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms