RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SSX7Q7RTT5 188 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 OR10X1Q8NGY0 326 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 C14orf144Q96I85 54 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 FGF23Q9GZV9 251 aaPredicted RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 FBLN5Q9UBX5 448 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 FAM157AC9JC47 383 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 CD5P06127 495 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 CECR9P0C854 216 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 RPL29P47914 159 aaKnown RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 TCTAP57738 103 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 GAMTQ14353 236 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 SNRNP40Q96DI7 357 aaKnown RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 QTRT1Q9BXR0 403 aaKnown RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 ZDHHC11Q9H8X9 412 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 TRAV17A0A0B4J275 112 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 IGHV2-70P01814 119 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
HPS4-201ENST00000336873 UCP1P25874 307 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 TNFRSF9Q07011 255 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 HES1Q14469 280 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 FXYD3Q14802 87 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 ABLIM2Q6H8Q1 611 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 C9orf106Q8NAJ2 232 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 TECTBQ96PL2 329 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 GINS3Q9BRX5 216 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 TACC2O95359 2948 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 A0A1B0GU03 582 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 DNPH1O43598 174 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 SMPD2O60906 423 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 ORM2P19652 201 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 IMMP2LQ96T52 175 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 NUDT16L1Q9BRJ7 211 aaKnown RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 DERL1Q9BUN8 251 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 SEMA5BQ9P283 1151 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 TMEM131Q92545 1883 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 GALR2O43603 387 aaPredicted RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 FTH1P19P0C7X4 201 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 PMCHP20382 165 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 COX7A1P24310 79 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 ATP5G3P48201 142 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 CAMPP49913 170 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 TNFAIP6P98066 277 aaPredicted RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 MEF2BQ02080 365 aaPredicted RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 S100A7AQ86SG5 101 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 RBMXL3Q8N7X1 1067 aaKnown RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 COMMD5Q9GZQ3 224 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 PARLQ9H300 379 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 TRGV8A0A0C4DH27 118 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 F6UZH7 168 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 K7N7A8 449 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 M0R143 59 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 SLC17A3O00476 420 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 KRTDAPP60985 99 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 FOXC1Q12948 553 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 ICAM4Q14773 271 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 PSG5Q15238 335 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 ACOT6Q3I5F7 207 aaPredicted RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 KCNIP4Q6PIL6 250 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 Q6ZPA2 131 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 SGMS2Q8NHU3 365 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 UHRF2Q96PU4 802 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 RYDENQ9NUL5 291 aaKnown RBP6.92□□□□□ -1.3
HPS4-201ENST00000336873 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
HPS4-201ENST00000336873 A0A1B0GUS0 222 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 RRHO14718 337 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 TNFSF4P23510 183 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 CD1BP29016 333 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 KLF3P57682 345 aaPredicted RBP6.91□□□□□ -1.3
HPS4-201ENST00000336873 SUMO1P63165 101 aaKnown RBP6.91□□□□□ -1.3
HPS4-201ENST00000336873 HIST1H3AP68431 136 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 HCP5Q6MZN7 132 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 TCF23Q7RTU1 214 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 SLC35E3Q7Z769 313 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 FAM216BQ8N7L0 139 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 CLCF1Q9UBD9 225 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 S4R3C0 116 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 OOEPA6NGQ2 149 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 ID3Q02535 119 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 RPP25LQ8N5L8 163 aaKnown RBP6.91□□□□□ -1.3
HPS4-201ENST00000336873 TRGV10A0A0A0MS01 117 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 C21orf140B9A014 251 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 NAPSAO96009 420 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 OPRK1P41145 380 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 MLANAQ16655 118 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 CRIP3Q6Q6R5 217 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 WIPI2Q9Y4P8 454 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
HPS4-201ENST00000336873 ACP1P24666 158 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms