RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CEACAM16Q2WEN9 425 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 SMIM15Q7Z3B0 74 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 ANKRD37Q7Z713 158 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 FAM122AQ96E09 287 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 KIR2DS1A0A191URI9 304 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 A0A1W2PS18 150 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 K7ESF4 209 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 ZFAND5O76080 213 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TFF1P04155 84 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 KIR2DS4P43632 304 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 KIR2DS1Q14954 304 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 SPATA46Q5T0L3 261 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 STUMQ69YW2 141 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 MKXQ8IYA7 352 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 ZNF441Q8N8Z8 693 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 DEFB108AA8MXU0 73 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 IGLV3-1P01715 115 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 NTF4P34130 210 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 RPL31P62899 125 aaKnown RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 PRDX4Q13162 271 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 RNASEKQ6P5S7 137 aaKnown RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 CENPVQ7Z7K6 275 aaPredicted RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 YRDCQ86U90 279 aaKnown RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 NUDT10Q8NFP7 164 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 SH2D7A6NKC9 451 aaPredicted RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
HERC6-202ENST00000273960 ZNF585BQ52M93 769 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 RHBDD2Q6NTF9 364 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 PCSK4Q6UW60 755 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TCTEX1D1Q8N7M0 179 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 OR5A2Q8NGI9 324 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 CLEC7AQ9BXN2 247 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 CST9LQ9H4G1 147 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 CLEC5AQ9NY25 188 aa10.79□□□□□ -0.68
HERC6-202ENST00000273960 TPRP12270 2363 aaKnown RBP10.78□□□□□ -0.68
HERC6-202ENST00000273960 SAP30O75446 220 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 VENTXO95231 258 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 NUDT3O95989 172 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 GMPPAQ96IJ6 420 aaPredicted RBP10.78□□□□□ -0.68
HERC6-202ENST00000273960 ZPBPQ9BS86 351 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 IGHV3-43A0A0B4J1X8 118 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 IGHV2OR16-5A0A0B4J2B6 119 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 A0A1W2PRS3 328 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 K7EN84 100 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 IGHV3-43DP0DP04 118 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 PDLIM3Q53GG5 364 aaPredicted RBP10.78□□□□□ -0.68
HERC6-202ENST00000273960 SPATA31B1PQ5VZV4 182 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 Q8N976 141 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 NUDT11Q96G61 164 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 ABHD14BQ96IU4 210 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 GP6Q9HCN6 339 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 MLNRO43193 412 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 CD24P25063 80 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 CEBPDP49716 269 aaPredicted RBP10.78□□□□□ -0.68
HERC6-202ENST00000273960 C1orf185Q5T7R7 199 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 OR2Y1Q8NGV0 311 aa10.78□□□□□ -0.68
HERC6-202ENST00000273960 C5orf49A4QMS7 147 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 NPIPB13A6NJU9 1138 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 NPIPB4C9JG80 1138 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 RRHO14718 337 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 SELENOVP59797 346 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 FOXL1Q12952 345 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 OCIAD2Q56VL3 154 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 AGBL5Q8NDL9 886 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 SLC24A4Q8NFF2 622 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 RFESDQ8TAC1 157 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 HINT2Q9BX68 163 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 MEGF9Q9H1U4 602 aa10.77□□□□□ -0.68
HERC6-202ENST00000273960 HSBP1O75506 76 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 FOXH1O75593 365 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 S1PR2O95136 353 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 CA2P00918 260 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 CAMPP49913 170 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 OR8B8Q15620 311 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
HERC6-202ENST00000273960 A8MXE2 369 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 SYNGR3O43761 229 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 RHBDL1O75783 438 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 CD99P14209 185 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 SRYQ05066 204 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 ZNF324BQ6AW86 544 aaPredicted RBP10.77□□□□□ -0.69
HERC6-202ENST00000273960 MED12LQ86YW9 2145 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 KLHDC1Q8N7A1 406 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 IL36GQ9NZH8 169 aa10.77□□□□□ -0.69
HERC6-202ENST00000273960 YTHDF2Q9Y5A9 579 aaKnown RBP10.77□□□□□ -0.69
HERC6-202ENST00000273960 A0A0J9YW62 118 aa10.76□□□□□ -0.69
HERC6-202ENST00000273960 NGFP01138 241 aa10.76□□□□□ -0.69
HERC6-202ENST00000273960 HIST3H3Q16695 136 aa10.76□□□□□ -0.69
HERC6-202ENST00000273960 PRR27Q6MZM9 219 aa10.76□□□□□ -0.69
HERC6-202ENST00000273960 MRPL21Q7Z2W9 205 aaKnown RBP10.76□□□□□ -0.69
HERC6-202ENST00000273960 VKORC1L1Q8N0U8 176 aa10.76□□□□□ -0.69
HERC6-202ENST00000273960 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms