RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MBNL3Q9NUK0 354 aaKnown RBP14□□□□□ -0.17
SQLE-201ENST00000265896 ZNRD1Q9P1U0 126 aa14□□□□□ -0.17
SQLE-201ENST00000265896 PLXNB1O43157 2135 aa14□□□□□ -0.17
SQLE-201ENST00000265896 TRBV20OR9-2A0A075B6H5 130 aa14□□□□□ -0.17
SQLE-201ENST00000265896 TRBV6-6A0A0A6YYG2 114 aa14□□□□□ -0.17
SQLE-201ENST00000265896 YKT6O15498 198 aa14□□□□□ -0.17
SQLE-201ENST00000265896 CD82P27701 267 aa14□□□□□ -0.17
SQLE-201ENST00000265896 FOXF2Q12947 444 aa14□□□□□ -0.17
SQLE-201ENST00000265896 NEIL1Q96FI4 390 aaPredicted RBP14□□□□□ -0.17
SQLE-201ENST00000265896 STRADBQ9C0K7 418 aa14□□□□□ -0.17
SQLE-201ENST00000265896 ABI3Q9P2A4 366 aa14□□□□□ -0.17
SQLE-201ENST00000265896 YLPM1P49750 1951 aaKnown RBP13.99□□□□□ -0.17
SQLE-201ENST00000265896 SCO2A0A1W2PP80 73 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 PROP1O75360 226 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 ARL14EPLP0DKL9 152 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 REC114Q7Z4M0 266 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 SGMS2Q8NHU3 365 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 R3HDM4Q96D70 268 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 M0R1X1 148 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 TDRG1Q3Y452 100 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 PRAMEF5Q5TYX0 476 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 MOB3BQ86TA1 216 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 TMEM242Q9NWH2 141 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 AKAP13Q12802 2813 aa13.99□□□□□ -0.17
SQLE-201ENST00000265896 C15orf62A8K5M9 175 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 FOXH1O75593 365 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 JOSD1Q15040 202 aaPredicted RBP13.98□□□□□ -0.17
SQLE-201ENST00000265896 ZNF146Q15072 292 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 C11orf53Q8IXP5 236 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 TRAPPC1Q9Y5R8 145 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 LRBAP50851 2863 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
SQLE-201ENST00000265896 CBLN1P23435 193 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 GATA2P23769 480 aaPredicted RBP13.98□□□□□ -0.17
SQLE-201ENST00000265896 CCL11P51671 97 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 TEX38Q6PEX7 206 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 LINC00596Q86U02 117 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 DEFB108BQ8NET1 73 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 OR2Z1Q8NG97 314 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 CD1BP29016 333 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 SOX8P57073 446 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 CATR1Q13166 79 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
SQLE-201ENST00000265896 LINC01551Q86U37 167 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 Q8TCH9 128 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 NANOS1Q8WY41 292 aaKnown RBP13.98□□□□□ -0.17
SQLE-201ENST00000265896 CTDSP1Q9GZU7 261 aa13.98□□□□□ -0.17
SQLE-201ENST00000265896 PTPRZ1P23471 2315 aaPredicted RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 ZNF705FA8MVS1 300 aaPredicted RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 F2Z2F3 143 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 ZNF705DP0CH99 300 aaPredicted RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 ZNF705BP0CI00 300 aaPredicted RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 OR5I1Q13606 314 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 TMEM164Q5U3C3 297 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 C1orf229Q6ZS94 237 aaPredicted RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 MRPS18CQ9Y3D5 142 aaKnown RBP13.97□□□□□ -0.17
SQLE-201ENST00000265896 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 SLC31A2O15432 143 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 HOXA6P31267 233 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 HLA-DRB5Q30154 266 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 WDR82Q6UXN9 313 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 CD177Q8N6Q3 437 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 LRRC29Q8WV35 223 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 WIPI2Q9Y4P8 454 aa13.97□□□□□ -0.17
SQLE-201ENST00000265896 RNF212BA8MTL3 300 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 TDGF1P13385 188 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 GPR12P47775 334 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 ZNF134P52741 427 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 PAX5Q02548 391 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 ZNF766Q5HY98 468 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 SEPSECSQ9HD40 501 aaKnown RBP13.96□□□□□ -0.17
SQLE-201ENST00000265896 A8MWP6 167 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 MRPL49Q13405 166 aaKnown RBP13.96□□□□□ -0.17
SQLE-201ENST00000265896 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
SQLE-201ENST00000265896 OR6C3Q9NZP0 311 aa13.96□□□□□ -0.17
SQLE-201ENST00000265896 ZZEF1O43149 2961 aa13.96□□□□□ -0.18
SQLE-201ENST00000265896 CLDN14O95500 239 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 CASP6P55212 293 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 DDA1Q9BW61 102 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 OOEPA6NGQ2 149 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 IGHV3-48P01763 117 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 PRB4P10163 310 aaPredicted RBP13.95□□□□□ -0.18
SQLE-201ENST00000265896 ACP1P24666 158 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 BATFQ16520 125 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
SQLE-201ENST00000265896 TET2Q6N021 2002 aaPredicted RBP13.95□□□□□ -0.18
SQLE-201ENST00000265896 AHRRA9YTQ3 701 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 NPIPB11E5RHQ5 1161 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 NKX2-8O15522 239 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 CNN1P51911 297 aaKnown RBP13.95□□□□□ -0.18
SQLE-201ENST00000265896 TCL1AP56279 114 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 KIAA1644Q3SXP7 199 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 Q8N7P7 452 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 OR4A16Q8NH70 328 aa13.95□□□□□ -0.18
SQLE-201ENST00000265896 ACACAQ13085 2346 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 CD46P15529 392 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 RPL29P47914 159 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms