RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 AMBPP02760 352 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 FBLIM1Q8WUP2 373 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 H3BP45 60 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF737O75373 536 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 PRTN3P24158 256 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 PSG5Q15238 335 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 XAF1Q6GPH4 301 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNRF1Q8ND25 227 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 DMRTC1Q5HYR2 192 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 GATAD1Q8WUU5 269 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 TRAF4Q9BUZ4 470 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 DOK5Q9P104 306 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 FAM24AA6NFZ4 105 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 RAMP1O60894 148 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 Q6ZN92 141 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF600Q6ZNG1 722 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 KCNK15Q9H427 330 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV3OR16-10A0A075B7F0 116 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 DYNLT3P51808 116 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 RAB32Q13637 225 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-201ENST00000257181 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 FCER1GP30273 86 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 RELBQ01201 579 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 ALKAL2Q6UX46 152 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 STHQ8IWL8 128 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 GVQW1Q8N7I0 195 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 TPRX1Q8N7U7 411 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 UNC13CQ8NB66 2214 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 ICMTO60725 284 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 SCTP09683 121 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 FOXL1Q12952 345 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 DNAJC4Q9NNZ3 241 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 A0A0G2JK05 382 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 MMP7P09237 267 aaPredicted RBP11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 AMTP48728 403 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 FGFRL1Q8N441 504 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 OR52B4Q8NGK2 314 aa11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 SLIRPQ9GZT3 109 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-201ENST00000257181 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 B4DEV8 164 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 LINC00869P0C866 280 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 RND2P52198 227 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 PRSS12P56730 875 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ADIPOQQ15848 244 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 C1orf122Q6ZSJ8 110 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 RRHO14718 337 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 CELA3BP08861 270 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 SSTR5P35346 364 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ERVK11-1P61568 191 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 M6PRP20645 277 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF497Q6ZNH5 498 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 DRAM1Q8N682 238 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 GSX2Q9BZM3 304 aa11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-201ENST00000257181 E7EQL1 145 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 COL8A1P27658 744 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 AMELYQ99218 206 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 G3V3Q6 166 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 CEBPDP49716 269 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 NDUFA6P56556 154 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 HAGHQ16775 308 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 MFNGO00587 321 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 ERVS71-1P61550 626 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 C10orf111Q8N326 155 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms