RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ETHE1O95571 254 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 GPR183P32249 361 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 ZNF79Q15937 498 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 KCNE5Q9UJ90 142 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 NDUFA3O95167 84 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 SP9P0CG40 484 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 PGFP49763 221 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 ATP5G2Q06055 141 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 SCARF2Q96GP6 870 aaPredicted RBP9.62□□□□□ -0.87
MSH6-201ENST00000234420 SIGLEC7Q9Y286 467 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 SDK2Q58EX2 2172 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 ABCA4P78363 2273 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 PPICP45877 212 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 YBX1P67809 324 aaKnown RBP9.62□□□□□ -0.87
MSH6-201ENST00000234420 RNF7Q9UBF6 113 aa9.62□□□□□ -0.87
MSH6-201ENST00000234420 SF3B6Q9Y3B4 125 aaKnown RBP9.62□□□□□ -0.87
MSH6-201ENST00000234420 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 A0A1W2PRS3 328 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 ISG15P05161 165 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 RND3P61587 244 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SLC23A3Q6PIS1 610 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 ASAH2BP0C7U1 165 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SCAND1P57086 179 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 TCF24Q7RTU0 167 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 MC5RP33032 325 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 VDAC2P45880 294 aaPredicted RBP9.61□□□□□ -0.87
MSH6-201ENST00000234420 MDP1Q86V88 176 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 TMEM45BQ96B21 275 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 LINC01587Q99440 93 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SSBP3Q9BWW4 388 aaPredicted RBP9.61□□□□□ -0.87
MSH6-201ENST00000234420 SLC6A13Q9NSD5 602 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 HIGD1AQ9Y241 93 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 FOCADQ5VW36 1801 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 PPIAL4EA0A075B759 164 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 NDUFS6O75380 124 aaKnown RBP9.61□□□□□ -0.87
MSH6-201ENST00000234420 PPIAL4FP0DN26 164 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 MS4A5Q9H3V2 200 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 PPIAL4AQ9Y536 164 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 ZGRF1Q86YA3 2104 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 UCP3P55916 312 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 FGF5P12034 268 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SERF2P84101 59 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 IFITM3Q01628 133 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SH3BGRL3Q9H299 93 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 SSC5DA1L4H1 1573 aa9.61□□□□□ -0.87
MSH6-201ENST00000234420 CDKN1AP38936 164 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 ABHD14BQ96IU4 210 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 SCN4AP35499 1836 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 ZDBF2Q9HCK1 2354 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 IGHV1OR21-1A0A087WYE8 117 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 PGPA6NDG6 321 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 WNT9BO14905 357 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
MSH6-201ENST00000234420 APCDD1LQ8NCL9 501 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 SCNM1Q9BWG6 230 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 ALPK2Q86TB3 2170 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 NABP2Q9BQ15 211 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 NAA38Q9BRA0 125 aaKnown RBP9.6□□□□□ -0.87
MSH6-201ENST00000234420 CCL3P10147 92 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 FUT5Q11128 374 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 FAM181AQ8N9Y4 354 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 OR4A5Q8NH83 315 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 SDHCQ99643 169 aaPredicted RBP9.6□□□□□ -0.87
MSH6-201ENST00000234420 PCNX2A6NKB5 2137 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 PATJQ8NI35 1801 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 C10orf128Q5T292 105 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 NRTNQ99748 197 aa9.6□□□□□ -0.87
MSH6-201ENST00000234420 CTLA4P16410 223 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 SLC25A1P53007 311 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 TMEM78Q5T7P6 136 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 WDR34Q96EX3 536 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
MSH6-201ENST00000234420 HMGA1P17096 107 aaKnown RBP9.59□□□□□ -0.87
MSH6-201ENST00000234420 ANOS1P23352 680 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 NR2C2APQ86WQ0 139 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 MMD2Q8IY49 270 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 ZNF707Q96C28 371 aaPredicted RBP9.59□□□□□ -0.87
MSH6-201ENST00000234420 VSTM2LQ96N03 204 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 TRAV5A0A0B4J249 113 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 J3QW42 95 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 LINC00869P0C866 280 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 TIMM23BQ5SRD1 257 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 MYEOVQ96EZ4 313 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 METRNQ9UJH8 293 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 NRAPQ86VF7 1730 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 A8MWV9 139 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 MAPK1IP1LQ8NDC0 245 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 VSTM2AQ8TAG5 236 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 MRGPRX3Q96LB0 322 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 GPR82Q96P67 336 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms