RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 ZNRF1Q8ND25 227 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
NOD1-201ENST00000222823 FREM3P0C091 2139 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 SMIM6P0DI80 62 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 MST1P26927 711 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 SSTR5P35346 364 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 WDFY1Q8IWB7 410 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 ZNF837Q96EG3 531 aaPredicted RBP9.81□□□□□ -0.84
NOD1-201ENST00000222823 PPIAL4CA0A0B4J2A2 164 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 ZNF729A6NN14 1252 aaPredicted RBP9.8□□□□□ -0.84
NOD1-201ENST00000222823 GFRA3O60609 400 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 NPIPB7O75200 414 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 PPIAL4GP0DN37 164 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 G0S2P27469 103 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 SLC35B1P78383 322 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 FHL1Q13642 323 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 ABHD12Q8N2K0 398 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 SLC25A33Q9BSK2 321 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 MED13LQ71F56 2210 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 A0A087WV48 116 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 ZNF708P17019 499 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 LOXL3P58215 753 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 FAM3BP58499 235 aaPredicted RBP9.8□□□□□ -0.84
NOD1-201ENST00000222823 Q6ZN92 141 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 OR4C13Q8NGP0 309 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 ZNF430Q9H8G1 570 aaPredicted RBP9.8□□□□□ -0.84
NOD1-201ENST00000222823 BET1LQ9NYM9 111 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 A0A087X0M5 115 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 A0A1B0GX30 115 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 WNT9BO14905 357 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 SNCGO76070 127 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 CECR9P0C854 216 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 PLAURQ03405 335 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 VWA1Q6PCB0 445 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 BPIFA4PQ86YQ2 179 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 GBGT1Q8N5D6 347 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 OR4C5Q8NGB2 326 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 A0A1B0GTI1 187 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 PGPA6NDG6 321 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 EIF3GO75821 320 aaKnown RBP eCLIP9.8□□□□□ -0.84
NOD1-201ENST00000222823 APCSP02743 223 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 KLK2P20151 261 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 RPL13AP40429 203 aaKnown RBP9.8□□□□□ -0.84
NOD1-201ENST00000222823 TNFSF10P50591 281 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 SLC35E4Q6ICL7 350 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 FADS6Q8N9I5 356 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 MIOXQ9UGB7 285 aa9.8□□□□□ -0.84
NOD1-201ENST00000222823 PCNTO95613 3336 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 UMODP07911 640 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 PF4V1P10720 104 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 IGFBP3P17936 291 aaPredicted RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 ZNF273Q14593 569 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 RBPMS2Q6ZRY4 209 aaKnown RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 DOCK10Q96BY6 2186 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 NUP210Q8TEM1 1887 aaPredicted RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 A0A0G2JMM0 328 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 A0A1W2PPB8 328 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 A0A1W2PRS3 328 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 KIR3DP1A8MWS1 328 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 H0YL77 283 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 CD8AP01732 235 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 COMPP49747 757 aaPredicted RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 RND3P61587 244 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 FAM27E3Q08E93 113 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 NRN1LQ496H8 165 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 SPANXN1Q5VSR9 72 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 DNM1P46Q6ZS02 220 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 MUC15Q8N387 334 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 RTN4RQ9BZR6 473 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 RPL7P18124 248 aaKnown RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 TMEM186Q96B77 213 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 SMIM8Q96KF7 97 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
NOD1-201ENST00000222823 TM2D1Q9BX74 207 aa9.79□□□□□ -0.84
NOD1-201ENST00000222823 M0R143 59 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
NOD1-201ENST00000222823 RHBDL1O75783 438 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 TMEM30BQ3MIR4 351 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 UNQ5815/PRO19632Q6UWF5 114 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 MRPL13Q9BYD1 178 aaKnown RBP9.78□□□□□ -0.84
NOD1-201ENST00000222823 DNAJC4Q9NNZ3 241 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 TP53BP1Q12888 1972 aaPredicted RBP9.78□□□□□ -0.84
NOD1-201ENST00000222823 IGHV1-69-2A0A0G2JMI3 117 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 VKORC1L1Q8N0U8 176 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 DOCK8Q8NF50 2099 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 C12orf77C9JDV5 145 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 C8orf88P0DMB2 117 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 ID4P47928 161 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 FHITP49789 147 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms