RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 RBM5P52756 815 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMPD1-206ENST00000531336 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-206ENST00000531336 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
SMPD1-206ENST00000531336 BOLA2Q9H3K6 86 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 PCDHAC2Q9Y5I4 1007 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 MYH7P12883 1935 aa16.87■□□□□ 0.29
SMPD1-206ENST00000531336 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-206ENST00000531336 ATP5JP18859 108 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 MX1P20591 662 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 CRKP46108 304 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 MMP14P50281 582 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 SPTY2D1Q68D10 685 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-206ENST00000531336 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMPD1-206ENST00000531336 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
SMPD1-206ENST00000531336 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
SMPD1-206ENST00000531336 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
SMPD1-206ENST00000531336 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 RAI14Q9P0K7 980 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 LRP2BPQ9P2M1 347 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-206ENST00000531336 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
SMPD1-206ENST00000531336 GOLIM4O00461 696 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 TOMM70O94826 608 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 DIXDC1Q155Q3 683 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
SMPD1-206ENST00000531336 EDC3Q96F86 508 aaKnown RBP16.84■□□□□ 0.29
SMPD1-206ENST00000531336 GGA3Q9NZ52 723 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 TTC41PQ6P2S7 1318 aa16.84■□□□□ 0.29
SMPD1-206ENST00000531336 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 WNT10BO00744 389 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 AOX1Q06278 1338 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 MAP1SQ66K74 1059 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-206ENST00000531336 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-206ENST00000531336 HAUS7Q99871 368 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.28
SMPD1-206ENST00000531336 ERC2O15083 957 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
SMPD1-206ENST00000531336 HDLBPQ00341 1268 aaKnown RBP16.82■□□□□ 0.28
SMPD1-206ENST00000531336 MECOMQ03112 1051 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-206ENST00000531336 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
SMPD1-206ENST00000531336 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-206ENST00000531336 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 PI4K2BQ8TCG2 481 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 DAGLAQ9Y4D2 1042 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 AK9Q5TCS8 1911 aa16.82■□□□□ 0.28
SMPD1-206ENST00000531336 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
SMPD1-206ENST00000531336 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
SMPD1-206ENST00000531336 PDE1AP54750 535 aa16.81■□□□□ 0.28
SMPD1-206ENST00000531336 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
SMPD1-206ENST00000531336 HHIPL2Q6UWX4 724 aa16.81■□□□□ 0.28
SMPD1-206ENST00000531336 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
SMPD1-206ENST00000531336 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
SMPD1-206ENST00000531336 PRMT6Q96LA8 375 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-206ENST00000531336 ZDHHC15Q96MV8 337 aa16.81■□□□□ 0.28
SMPD1-206ENST00000531336 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 MYO1BO43795 1136 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-206ENST00000531336 GSTO1P78417 241 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-206ENST00000531336 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 ZNF384Q8TF68 577 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
SMPD1-206ENST00000531336 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
SMPD1-206ENST00000531336 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 STAP2Q9UGK3 403 aa16.8■□□□□ 0.28
SMPD1-206ENST00000531336 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
SMPD1-206ENST00000531336 GAKO14976 1311 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 PDE4AP27815 886 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 MAP3K12Q12852 859 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 GLIS2Q9BZE0 524 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-206ENST00000531336 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 PGAP2Q9UHJ9 254 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 TRPM7Q96QT4 1865 aa16.79■□□□□ 0.28
SMPD1-206ENST00000531336 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 ADM5C9JUS6 153 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 LDHCP07864 332 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 BTDP43251 543 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 FSTL1Q12841 308 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
SMPD1-206ENST00000531336 KRT26Q7Z3Y9 468 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
SMPD1-206ENST00000531336 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-206ENST00000531336 CYP7A1P22680 504 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms