RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 GTPBP6O43824 516 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SUSD5O60279 629 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF202O95125 648 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MAP3K6O95382 1288 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CEACAM5P06731 702 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 RAC2P15153 192 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MCM7P33993 719 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CNR2P34972 360 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SCTRP47872 440 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 USP11P51784 963 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SLURP1P55000 103 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GPLD1P80108 840 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CAP1Q01518 475 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MAP7Q14244 749 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 E2F4Q16254 413 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TMEM132EQ6IEE7 984 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 LRRC69Q6ZNQ3 347 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF605Q86T29 641 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PRIMA1Q86XR5 153 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DZIP3Q86Y13 1208 aaKnown RBP0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FAM181AQ8N9Y4 354 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SCARB1Q8WTV0 552 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CCDC120Q96HB5 630 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SGPP1Q9BX95 441 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KLC2Q9H0B6 622 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TNKS2Q9H2K2 1166 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CRCT1Q9UGL9 99 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ST6GALNAC2Q9UJ37 374 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GTF3C5Q9Y5Q8 519 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DMRT1Q9Y5R6 373 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SNX11Q9Y5W9 270 aa0.24□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PRR23D1E9PI22 279 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IRS4O14654 1257 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GNPATO15228 680 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KRT86O43790 486 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PLATP00750 562 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PRR23D2P0DMB1 279 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF37AP17032 561 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NFKB1P19838 968 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 BMP5P22003 454 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SSTR3P32745 418 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ADRA1BP35368 520 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GJA5P36382 358 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MLLT3P42568 568 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SMTNP53814 917 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 COL10A1Q03692 680 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TYRO3Q06418 890 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KRT81Q14533 505 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MIIPQ5JXC2 388 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NT5DC1Q5TFE4 455 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CNKSR3Q6P9H4 555 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MRGPRGQ86SM5 289 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SMG8Q8ND04 991 aaKnown RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PLD4Q96BZ4 506 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PNMA5Q96PV4 448 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SLC6A17Q9H1V8 727 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF552Q9H707 407 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SUGCTQ9HAC7 445 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FKBPLQ9UIM3 349 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DUSP10Q9Y6W6 482 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 U3KQE9 123 aa0.23□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MUC5ACP98088 5654 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MOXD2PA6NHM9 499 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 LINC01387J3KSC0 135 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FSCN2O14926 492 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 N4BP3O15049 544 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DDX3YO15523 660 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NARSO43776 548 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZFPL1O95159 310 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NDUFV2P19404 249 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 EIF2AK2P19525 551 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TNFRSF1BP20333 461 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CCKBRP32239 447 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 OXCT1P55809 520 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FHL3Q13643 280 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 R3HDM1Q15032 1099 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NUTM2GQ5VZR2 741 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IGFL4Q6B9Z1 124 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SEZ6L2Q6UXD5 910 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DLK2Q6UY11 383 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DHX32Q7L7V1 743 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FAM129CQ86XR2 697 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 C12orf50Q8NA57 414 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 C2CD4AQ8NCU7 369 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TMEM255BQ8WV15 326 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CEP63Q96MT8 703 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CARD10Q9BWT7 1032 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SSBP3Q9BWW4 388 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GSX2Q9BZM3 304 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 LNPKQ9C0E8 428 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ESF1Q9H501 851 aaKnown RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 LGR6Q9HBX8 967 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CYP4F12Q9HCS2 524 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 C1GALT1Q9NS00 363 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MBD1Q9UIS9 605 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PLAGL2Q9UPG8 496 aa0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FCGBPQ9Y6R7 5405 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1238P-201ENST00000517215 HRKO00198 91 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 EML1O00423 815 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FFAR3O14843 346 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms