RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SPRYD7Q5W111 196 aa18.65■□□□□ 0.58
CDC42SE1-205ENST00000491825 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
CDC42SE1-205ENST00000491825 MYO1BO43795 1136 aa18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 LRRC24Q50LG9 513 aa18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 FBXO33Q7Z6M2 555 aa18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 CTU1Q7Z7A3 348 aaKnown RBP18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 CFHR5Q9BXR6 569 aa18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.57
CDC42SE1-205ENST00000491825 TBC1D8O95759 1140 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 SREBF2Q12772 1141 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 ZNF296Q8WUU4 475 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 VEZTQ9HBM0 779 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 SERPINA10Q9UK55 444 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 ECM29Q5VYK3 1845 aa18.63■□□□□ 0.57
CDC42SE1-205ENST00000491825 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
CDC42SE1-205ENST00000491825 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
CDC42SE1-205ENST00000491825 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
CDC42SE1-205ENST00000491825 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
CDC42SE1-205ENST00000491825 TTF2Q9UNY4 1162 aaKnown RBP18.62■□□□□ 0.57
CDC42SE1-205ENST00000491825 PDE8BO95263 885 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 RASA3Q14644 834 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 GRIK5Q16478 980 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
CDC42SE1-205ENST00000491825 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 UNCXA6NJT0 531 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 GPR25O00155 361 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 ZBTB48P10074 688 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 RBM5P52756 815 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 AAMPQ13685 434 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 POLA2Q14181 598 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 SUPT20HL1Q3ZLR7 823 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 WNK4Q96J92 1243 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 ZNF70Q9UC06 446 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-205ENST00000491825 USP2O75604 605 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 CIAO1O76071 339 aa18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 FGFR2P21802 821 aa18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 CDAN1Q8IWY9 1227 aa18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 TEPSINQ96N21 525 aa18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 CRBNQ96SW2 442 aa18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE1-205ENST00000491825 EYA2O00167 538 aa18.58■□□□□ 0.56
CDC42SE1-205ENST00000491825 CRKP46108 304 aa18.58■□□□□ 0.56
CDC42SE1-205ENST00000491825 TNFAIP1Q13829 316 aa18.58■□□□□ 0.56
CDC42SE1-205ENST00000491825 SLC10A4Q96EP9 437 aa18.58■□□□□ 0.56
CDC42SE1-205ENST00000491825 TDRD3Q9H7E2 651 aaKnown RBP18.58■□□□□ 0.56
CDC42SE1-205ENST00000491825 HTTP42858 3142 aa18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 MANSC4A6NHS7 340 aaPredicted RBP18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 GJA5P36382 358 aa18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 LAMB1P07942 1786 aa18.57■□□□□ 0.56
CDC42SE1-205ENST00000491825 IGF2BP3O00425 579 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 ALDH1A1P00352 501 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 IREB2P48200 963 aaKnown RBP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 BCAMP50895 628 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 INHBEP58166 350 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 HDLBPQ00341 1268 aaKnown RBP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 PUM3Q15397 648 aaKnown RBP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 PKN2Q16513 984 aaKnown RBP18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 IFNL1Q8IU54 200 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 TBC1D22AQ8WUA7 517 aa18.56■□□□□ 0.56
CDC42SE1-205ENST00000491825 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
CDC42SE1-205ENST00000491825 SOX10P56693 466 aa18.55■□□□□ 0.56
CDC42SE1-205ENST00000491825 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
CDC42SE1-205ENST00000491825 ANKRD13AQ8IZ07 590 aa18.55■□□□□ 0.56
CDC42SE1-205ENST00000491825 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
CDC42SE1-205ENST00000491825 TCP10L2B9ZVM9 353 aa18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 FKTNO75072 461 aa18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 HMMRO75330 724 aa18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 TMEM39BQ9GZU3 492 aa18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 TNRC18O15417 2968 aaPredicted RBP18.54■□□□□ 0.56
CDC42SE1-205ENST00000491825 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 IFIT1P09914 478 aaKnown RBP18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 ZDHHC15Q96MV8 337 aa18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 MRIQ9BWK5 157 aa18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 SIL1Q9H173 461 aa18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
CDC42SE1-205ENST00000491825 FRAT2O75474 233 aaPredicted RBP18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 APOBEC3HQ6NTF7 200 aaKnown RBP18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 LPIN2Q92539 896 aa18.52■□□□□ 0.56
CDC42SE1-205ENST00000491825 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms