RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ECHDC1Q9NTX5 307 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 ERICH6BQ5W0A0 696 aa24.09■■□□□ 1.45
LIME1-205ENST00000480139 SMC1BQ8NDV3 1235 aa24.09■■□□□ 1.45
LIME1-205ENST00000480139 BCL11AQ9H165 835 aa24.09■■□□□ 1.45
LIME1-205ENST00000480139 TTC41PQ6P2S7 1318 aa24.09■■□□□ 1.45
LIME1-205ENST00000480139 SALL3Q9BXA9 1300 aa24.09■■□□□ 1.45
LIME1-205ENST00000480139 CYP2E1P05181 493 aaPredicted RBP24.08■■□□□ 1.45
LIME1-205ENST00000480139 ZAP70P43403 619 aa24.08■■□□□ 1.45
LIME1-205ENST00000480139 CHADLQ6NUI6 762 aa24.08■■□□□ 1.45
LIME1-205ENST00000480139 SNRKQ9NRH2 765 aa24.08■■□□□ 1.45
LIME1-205ENST00000480139 ABCF2Q9UG63 623 aa24.08■■□□□ 1.45
LIME1-205ENST00000480139 WNT10BO00744 389 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 FSTL1Q12841 308 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 DLGAP5Q15398 846 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 CFAP100Q494V2 611 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 RBM26Q5T8P6 1007 aaKnown RBP24.07■■□□□ 1.44
LIME1-205ENST00000480139 HHIPL2Q6UWX4 724 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 ERICH6Q7L0X2 663 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 CHD1LQ86WJ1 897 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 TEKT1Q969V4 418 aa24.07■■□□□ 1.44
LIME1-205ENST00000480139 SPDYE2BA6NHP3 402 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 SPDYE6P0CI01 402 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 CRKP46108 304 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 B4GALNT3Q6L9W6 998 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 CLEC11AQ9Y240 323 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 MYO5AQ9Y4I1 1855 aaKnown RBP24.06■■□□□ 1.44
LIME1-205ENST00000480139 PITPNM2Q9BZ72 1349 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 MYH2Q9UKX2 1941 aa24.06■■□□□ 1.44
LIME1-205ENST00000480139 MX1P20591 662 aa24.05■■□□□ 1.44
LIME1-205ENST00000480139 TTF1Q15361 905 aaPredicted RBP24.05■■□□□ 1.44
LIME1-205ENST00000480139 TBC1D9Q6ZT07 1266 aa24.05■■□□□ 1.44
LIME1-205ENST00000480139 ZDHHC15Q96MV8 337 aa24.05■■□□□ 1.44
LIME1-205ENST00000480139 HAUS7Q99871 368 aa24.05■■□□□ 1.44
LIME1-205ENST00000480139 NBPF9Q3BBW0 867 aa24.04■■□□□ 1.44
LIME1-205ENST00000480139 TMED8Q6PL24 325 aaPredicted RBP24.04■■□□□ 1.44
LIME1-205ENST00000480139 DZIP1Q86YF9 867 aaKnown RBP24.04■■□□□ 1.44
LIME1-205ENST00000480139 SLF2Q8IX21 1173 aa24.04■■□□□ 1.44
LIME1-205ENST00000480139 OTUD7AQ8TE49 926 aaPredicted RBP24.04■■□□□ 1.44
LIME1-205ENST00000480139 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
LIME1-205ENST00000480139 LRP2BPQ9P2M1 347 aa24.04■■□□□ 1.44
LIME1-205ENST00000480139 STAP2Q9UGK3 403 aa24.04■■□□□ 1.44
LIME1-205ENST00000480139 ERC2O15083 957 aa24.03■■□□□ 1.44
LIME1-205ENST00000480139 RBM5P52756 815 aaKnown RBP eCLIP24.03■■□□□ 1.44
LIME1-205ENST00000480139 MECOMQ03112 1051 aa24.03■■□□□ 1.44
LIME1-205ENST00000480139 FAM163AQ96GL9 167 aaPredicted RBP24.03■■□□□ 1.44
LIME1-205ENST00000480139 BOLA2Q9H3K6 86 aa24.03■■□□□ 1.44
LIME1-205ENST00000480139 PIH1D3Q9NQM4 214 aaKnown RBP24.03■■□□□ 1.44
LIME1-205ENST00000480139 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
LIME1-205ENST00000480139 GAKO14976 1311 aa24.03■■□□□ 1.44
LIME1-205ENST00000480139 MYO1BO43795 1136 aa24.02■■□□□ 1.44
LIME1-205ENST00000480139 GSTO1P78417 241 aa24.02■■□□□ 1.44
LIME1-205ENST00000480139 PI4K2BQ8TCG2 481 aa24.02■■□□□ 1.44
LIME1-205ENST00000480139 NSUN4Q96CB9 384 aaKnown RBP24.02■■□□□ 1.44
LIME1-205ENST00000480139 PRMT6Q96LA8 375 aaPredicted RBP24.02■■□□□ 1.44
LIME1-205ENST00000480139 RAI14Q9P0K7 980 aa24.02■■□□□ 1.44
LIME1-205ENST00000480139 NDUFB9Q9Y6M9 179 aa24.02■■□□□ 1.44
LIME1-205ENST00000480139 GLRX3O76003 335 aaKnown RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 DIXDC1Q155Q3 683 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 MAP1SQ66K74 1059 aaPredicted RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 CENPQQ7L2Z9 268 aaPredicted RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 ZNF384Q8TF68 577 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 DCPSQ96C86 337 aaKnown RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 DNAJC2Q99543 621 aaKnown RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 ANTXR1Q9H6X2 564 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 PAG1Q9NWQ8 432 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 DAGLAQ9Y4D2 1042 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 PCDHAC2Q9Y5I4 1007 aa24.01■■□□□ 1.43
LIME1-205ENST00000480139 POLR2AP24928 1970 aaKnown RBP24.01■■□□□ 1.43
LIME1-205ENST00000480139 PDE1AP54750 535 aa24■■□□□ 1.43
LIME1-205ENST00000480139 ANGEL2Q5VTE6 544 aaKnown RBP24■■□□□ 1.43
LIME1-205ENST00000480139 APOBEC3HQ6NTF7 200 aaKnown RBP24■■□□□ 1.43
LIME1-205ENST00000480139 MROH7-TTC4A0A0A0MT08 1334 aa24■■□□□ 1.43
LIME1-205ENST00000480139 ASTN2O75129 1339 aaPredicted RBP24■■□□□ 1.43
LIME1-205ENST00000480139 AOX1Q06278 1338 aa24■■□□□ 1.43
LIME1-205ENST00000480139 GOLIM4O00461 696 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 ITGBL1O95965 494 aaPredicted RBP23.99■■□□□ 1.43
LIME1-205ENST00000480139 LDHCP07864 332 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 MAP3K12Q12852 859 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 SPDYE2Q495Y8 402 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 TSHZ3Q63HK5 1081 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 CDC37L1Q7L3B6 337 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 APOBEC3FQ8IUX4 373 aaKnown RBP23.99■■□□□ 1.43
LIME1-205ENST00000480139 MYH7P12883 1935 aa23.99■■□□□ 1.43
LIME1-205ENST00000480139 IDH1O75874 414 aaKnown RBP23.98■■□□□ 1.43
LIME1-205ENST00000480139 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
LIME1-205ENST00000480139 OSBPL3Q9H4L5 887 aa23.98■■□□□ 1.43
LIME1-205ENST00000480139 NAA16Q6N069 864 aaPredicted RBP23.97■■□□□ 1.43
LIME1-205ENST00000480139 KRT26Q7Z3Y9 468 aa23.97■■□□□ 1.43
LIME1-205ENST00000480139 SULF1Q8IWU6 871 aa23.97■■□□□ 1.43
LIME1-205ENST00000480139 PASKQ96RG2 1323 aa23.97■■□□□ 1.43
LIME1-205ENST00000480139 GPR75-ASB3A0A0A6YYF3 556 aa23.96■■□□□ 1.43
LIME1-205ENST00000480139 C1QTNF8P60827 252 aa23.96■■□□□ 1.43
LIME1-205ENST00000480139 PLEKHM2Q8IWE5 1019 aa23.96■■□□□ 1.43
LIME1-205ENST00000480139 EDC3Q96F86 508 aaKnown RBP23.96■■□□□ 1.43
LIME1-205ENST00000480139 TDRD3Q9H7E2 651 aaKnown RBP23.96■■□□□ 1.43
LIME1-205ENST00000480139 ZNF70Q9UC06 446 aaPredicted RBP23.96■■□□□ 1.43
LIME1-205ENST00000480139 TRPM7Q96QT4 1865 aa23.96■■□□□ 1.43
LIME1-205ENST00000480139 MAP4K4O95819 1239 aaPredicted RBP23.95■■□□□ 1.42
LIME1-205ENST00000480139 FKBP1CQ5VVH2 108 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms