RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 TMOD1P28289 359 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 KLHL10Q6JEL2 608 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 EP400NLQ6ZTU2 488 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 RAB11FIP4Q86YS3 637 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 IQCDQ96DY2 449 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 MTRF1LQ9UGC7 380 aaKnown RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 GCNAQ96QF7 691 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 PSMC4P43686 418 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 HAUS1Q96CS2 278 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 ZFYVE9O95405 1425 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 E7EVH7 732 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 GABPAQ06546 454 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 LGSNQ5TDP6 509 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 FAM193AP78312 1265 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 AGTPBP1Q9UPW5 1226 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 INF2Q27J81 1249 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 SPC24Q8NBT2 197 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 PUS7Q96PZ0 661 aaKnown RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 HAUS8Q9BT25 410 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 BCAP29Q9UHQ4 241 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 URB2Q14146 1524 aaKnown RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 TPD52P55327 224 aaPredicted RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 CCDC85AQ96PX6 553 aaPredicted RBP8.35□□□□□ -1.07
MED28-201ENST00000237380 SULF1Q8IWU6 871 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 CCDC63Q8NA47 563 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 ZNF644Q9H582 1327 aaPredicted RBP8.34□□□□□ -1.07
MED28-201ENST00000237380 PPFIA3O75145 1194 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 FLIIQ13045 1269 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 MAIP1Q8WWC4 291 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 CSRNP1Q96S65 589 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 ABCC5O15440 1437 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 DONSONQ9NYP3 566 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 ABCC10Q5T3U5 1492 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 PICALMQ13492 652 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 OSBPP22059 807 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 PLCD1P51178 756 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 SATB1Q01826 763 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 MCMDC2Q4G0Z9 681 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 VPS52Q8N1B4 723 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 PLCH2O75038 1416 aa8.34□□□□□ -1.07
MED28-201ENST00000237380 OATP04181 439 aa8.34□□□□□ -1.08
MED28-201ENST00000237380 A2MP01023 1474 aa8.34□□□□□ -1.08
MED28-201ENST00000237380 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 A6NNZ2 444 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 TUBB8Q3ZCM7 444 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 ZC3H15Q8WU90 426 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 FAM204AQ9H8W3 233 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 ATP2A3Q93084 1043 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 SLC26A6Q9BXS9 759 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 HOXD10P28358 340 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 FAM177A1Q8N128 213 aaPredicted RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 BBS5Q8N3I7 341 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 BCCIPQ9P287 314 aaKnown RBP eCLIP8.33□□□□□ -1.08
MED28-201ENST00000237380 ATP8B3O60423 1300 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 YTHDC2Q9H6S0 1430 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 ZNF233A6NK53 670 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 SARNPP82979 210 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 FBF1Q8TES7 1133 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 ABI1Q8IZP0 508 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 IVLP07476 585 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 GEN1Q17RS7 908 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 NEK11Q8NG66 645 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 FAM212AQ96EL1 285 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 GRM8O00222 908 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 TACC1O75410 805 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 PRPF38AQ8NAV1 312 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 FAM81BQ96LP2 452 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 KRT86O43790 486 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
MED28-201ENST00000237380 ARMC9Q7Z3E5 817 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 UBE3BQ7Z3V4 1068 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
MED28-201ENST00000237380 PPP1R2P3Q6NXS1 205 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 CCDC50Q8IVM0 306 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 ADPGKQ9BRR6 497 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 PTPREP23469 700 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 MARCKSP29966 332 aaPredicted RBP8.32□□□□□ -1.08
MED28-201ENST00000237380 YARSP54577 528 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms