RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 OR5H8P0DN80 308 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 EDN2P20800 178 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FUT6P51993 359 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PDZK1IP1Q13113 114 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TAF9Q16594 264 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PRAMEF6Q5VXH4 476 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM268Q5VZI3 342 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TRAT1Q6PIZ9 186 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 OR4A4PQ8NGN8 299 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 LHX4Q969G2 390 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 BORCS8Q96FH0 119 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FGF23Q9GZV9 251 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 NECAP2Q9NVZ3 263 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 STAB2Q8WWQ8 2551 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PPIAL4EA0A075B759 164 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV2-70DA0A0C4DH43 119 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM218A2RU14 115 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 CLPSL1A2RUU4 121 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PPIAL4DF5H284 164 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PRYO14603 147 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TAAR5O14804 337 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SIGLEC5O15389 551 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TRIAP1O43715 76 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 DEDDO75618 318 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 GAPDHP04406 335 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PPIAL4FP0DN26 164 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 DLX1P56177 255 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 RBM11P57052 281 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM187Q14656 261 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 BEAN1Q3B7T3 259 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PIGYQ3MUY2 71 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM155Q4W5P6 130 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 Q6ZS49 121 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SGPP2Q8IWX5 399 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 OSR2Q8N2R0 312 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TMED6Q8WW62 240 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 DYRK2Q92630 601 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SMIM8Q96KF7 97 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 CMSS1Q9BQ75 279 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SRSF8Q9BRL6 282 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 METTL8Q9H825 291 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 IL19Q9UHD0 177 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 CARHSP1Q9Y2V2 147 aaKnown RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PPIAL4CA0A0B4J2A2 164 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PQLC2LA1A4F0 135 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 DIRC3C9JPN6 131 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 TIMM23O14925 209 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PDCD6O75340 191 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 ATG12O94817 140 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 APOC3P02656 99 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 HOXB5P09067 269 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 COX5BP10606 129 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 PAX8Q06710 450 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 GGNBP1Q5YKI7 109 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 WDR25Q64LD2 544 aaPredicted RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 IL34Q6ZMJ4 242 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 FAM219AQ8IW50 185 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 LYG1Q8N1E2 194 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 ARL11Q969Q4 196 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 MOB3AQ96BX8 217 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SAT2Q96F10 170 aaPredicted RBP3.94□□□□□ -1.78
LINC00550-201ENST00000629293 MICU1Q9BPX6 476 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 ARV1Q9H2C2 271 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 NAA60Q9H7X0 242 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 SIRT7Q9NRC8 400 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 C1RLQ9NZP8 487 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 MIOXQ9UGB7 285 aa3.94□□□□□ -1.78
LINC00550-201ENST00000629293 GPR137BO60478 399 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF728P0DKX0 622 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PIGPP57054 158 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SRSF7Q16629 238 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 IAH1Q2TAA2 248 aaPredicted RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PLCXD3Q63HM9 321 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CALHM1Q8IU99 346 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SAXO1Q8IYX7 474 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SSMEM1Q8WWF3 244 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 R3HDM4Q96D70 268 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 C12orf4Q9NQ89 552 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 RCC2Q9P258 522 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ONECUT1Q9UBC0 465 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SLC7A11Q9UPY5 501 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 KIR2DS1A0A191URI9 304 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 BTBD17A6NE02 478 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 FAM74A7A6NL05 159 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 G3V4G9 280 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ENSAO43768 121 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PLATP00750 562 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CTRB1P17538 263 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CA6P23280 308 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 S100A10P60903 97 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PJVKQ0ZLH3 352 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 FAM74A3Q4VXF1 159 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 RPL7L1Q6DKI1 246 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CTRB2Q6GPI1 263 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 OR11L1Q8NGX0 322 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms