RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PLSCR4Q9NRQ2 329 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 TNCP24821 2201 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 ODAMA1E959 279 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 LINC00473A8K010 186 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZZEF1O43149 2961 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 DFFBO76075 338 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 SNRPCP09234 159 aaKnown RBP9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 COX5AP20674 150 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 SELENOVP59797 346 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 HBG1P69891 147 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 HBG2P69892 147 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF645Q8N7E2 425 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 TMEM37Q8WXS4 190 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 SNRNP40Q96DI7 357 aaKnown RBP9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 RNF212BA8MTL3 300 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 UBE2CO00762 179 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 CXCL1P09341 107 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 TLE4Q04727 773 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 PRAMEF5Q5TYX0 476 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 ETFRF1Q6IPR1 90 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 ABHD17AQ96GS6 310 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 C5orf30Q96GV9 206 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 CCL13Q99616 98 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 FAM215AQ9Y5M1 114 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 IFNA10P01566 189 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 P2RY6Q15077 328 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 MSMO1Q15800 293 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 NCR3LG1Q68D85 454 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNRD1Q9P1U0 126 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 TCAPO15273 167 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 GYPAP02724 150 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 S100A7P31151 101 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 TAS2R30P59541 319 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 Q8WTZ3 238 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 FRZBQ92765 325 aa9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBNL3Q9NUK0 354 aaKnown RBP9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 RALYQ9UKM9 306 aaKnown RBP9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 ANKHD1Q8IWZ3 2542 aaKnown RBP9.63□□□□□ -0.87
ARHGEF1-220ENST00000600274 IGKV1D-17A0A075B6S4 117 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 A0A087X0M5 115 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 A0A1B0GX30 115 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 CLDN14O95500 239 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF295-AS1Q8N0V1 137 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 GCSAMQ8N6F7 178 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 FAM210BQ96KR6 192 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 ARV1Q9H2C2 271 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 TRBV6-6A0A0A6YYG2 114 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 AGAP20933 346 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 TNFAIP6P98066 277 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 C1orf185Q5T7R7 199 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 PRSS33Q8NF86 280 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 TVP23CQ96ET8 276 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 MRPL37Q9BZE1 423 aaKnown RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 LAMP3Q9UQV4 416 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 DUXBA0A1W2PPF3 345 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 MKRN2OSH3BPM6 223 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 HNF1AP20823 631 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 FGF7P21781 194 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 SRSF7Q16629 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 HAPLN4Q86UW8 402 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 LYG1Q8N1E2 194 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 FAM216BQ8N7L0 139 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 LHX4Q969G2 390 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 TP53TG5Q9Y2B4 290 aa9.62□□□□□ -0.87
ARHGEF1-220ENST00000600274 LRBAP50851 2863 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 CACNA1BQ00975 2339 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 MARCH11A6NNE9 402 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 CD200P41217 278 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 SLC35E4Q6ICL7 350 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 SPSB3Q6PJ21 355 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 RBMXL3Q8N7X1 1067 aaKnown RBP9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 IL22RA2Q969J5 263 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 R3HDM4Q96D70 268 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 TMPRSS2O15393 492 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 SLC31A2O15432 143 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 RPP30P78346 268 aaKnown RBP9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 GFRALQ6UXV0 394 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF525Q8N782 197 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF709Q8N972 641 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 QTRT1Q9BXR0 403 aaKnown RBP9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 COL12A1Q99715 3063 aa9.61□□□□□ -0.87
ARHGEF1-220ENST00000600274 J3QW42 95 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 TFF3Q07654 80 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 IGFL2Q6UWQ7 119 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms