RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 JPT1Q9UK76 154 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 KIR2DL5BA0A0G2JN68 375 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 KIR2DL5BA0A0G2JPC4 375 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 A0A1W2PNR3 127 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 RAMP3O60896 148 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 ADMP35318 185 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 TRA2AQ13595 282 aaKnown RBP eCLIP6.11□□□□□ -1.439e-7■□□□□ 11
CNOT1-216ENST00000569240 MLF2Q15773 248 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 KIR2DL5AQ8N109 375 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FAM89BQ8N5H3 189 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 TMEM101Q96IK0 257 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 A6NCN8 305 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FAM231BA6NCW3 169 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 CXCL13O43927 109 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 GPX1P07203 203 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 IL11P20809 199 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 SIGLEC14Q08ET2 396 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FAM166AQ6J272 317 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LINC01551Q86U37 167 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 TMEFF1Q8IYR6 380 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 KCNK17Q96T54 332 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 TMEM238C9JI98 176 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 MGST3O14880 152 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 PRDX2P32119 198 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 ZXDAP98168 799 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FGF11Q92914 225 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LOXL4Q96JB6 756 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 WNT10AQ9GZT5 417 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 HS3ST3B1Q9Y662 390 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 KIAA1551Q9HCM1 1747 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 A0A1W2PP11 408 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LHFPL1Q86WI0 220 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 OR52M1Q8NGK5 317 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 OR1B1Q8NGR6 318 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF502Q8TBZ5 544 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 HDHD3Q9BSH5 251 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 IGHV2OR16-5A0A0B4J2B6 119 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 GOSR1O95249 250 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 RBP4P02753 201 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 GNB2P62879 340 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 SLC25A47Q6Q0C1 308 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 SLC25A48Q6ZT89 311 aaKnown RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 UBALD2Q8IYN6 164 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LYG1Q8N1E2 194 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FER1L6-AS1Q8NA97 138 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF355PQ9NSJ1 428 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 CXCL1P09341 107 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 LHFPL4Q7Z7J7 247 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 TSKUQ8WUA8 353 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 H1FXQ92522 213 aaKnown RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 FLYWCH2Q96CP2 140 aaKnown RBP6.11□□□□□ -1.43
CNOT1-216ENST00000569240 OR2H1Q9GZK4 316 aa6.11□□□□□ -1.43
CNOT1-216ENST00000569240 PPIAL4DF5H284 164 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 TEX43Q6ZNM6 134 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 CNEP1R1Q8N9A8 125 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 EAF1Q96JC9 268 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 RTN4RQ9BZR6 473 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 TNFRSF19Q9NS68 423 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 K7EP13 123 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 TIMP3P35625 211 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 PGFP49763 221 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 P2RY6Q15077 328 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 RSPO3Q9BXY4 272 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 PRDM14Q9GZV8 571 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 ORM2P19652 201 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 YPEL3P61236 119 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 LYZP61626 148 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 GAGE5Q13069 117 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 GAGE6Q13070 117 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 DRAM1Q8N682 238 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 NABP2Q9BQ15 211 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 UFC1Q9Y3C8 167 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 NINQ8N4C6 2090 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF205O95201 554 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 BHLHA15Q7RTS1 189 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 PRR13Q9NZ81 148 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 PROCRQ9UNN8 238 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 FAM181BA6NEQ2 426 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 FNDC10F2Z333 226 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 K7EP34 96 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 REG1BP48304 166 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 ATXN8Q156A1 80 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 ALKBH3Q96Q83 286 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 H0YIZ8 118 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 APOHP02749 345 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 DIRC2Q96SL1 478 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
CNOT1-216ENST00000569240 FNDC4Q9H6D8 234 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-216ENST00000569240 PEX7O00628 323 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 C17orf99Q6UX52 265 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms