RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MT-ND6P03923 174 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HPNP05981 417 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 LTBRP36941 435 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HIST1H4AP62805 103 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 RPL23P62829 140 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 EXOSC7Q15024 291 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 C5orf64Q2M2E5 130 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 BAALCQ8WXS3 180 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 GABRG3Q99928 467 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MLST8Q9BVC4 326 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CDC42EP3Q9UKI2 254 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 LOC107986453A0A1B0GWG9 222 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 DUXBA0A1W2PPF3 345 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CST7O76096 145 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 S1PR2O95136 353 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR2H2O95918 312 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ASIPP42127 132 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 Q6ZVL8 140 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 LGI3Q8N145 548 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 IL22RA1Q8N6P7 574 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR1N2Q8NGR9 330 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 C18orf12Q96KH6 178 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RNF208Q9H0X6 261 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZNF331Q9NQX6 463 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 UQCR10Q9UDW1 63 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ACYP1P07311 99 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 FOLR3P41439 243 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF726P1Q15940 193 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NRTNQ99748 197 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NICN1Q9BSH3 213 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 DENND4CQ5VZ89 1909 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CEP192Q8TEP8 1941 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 TRBV9A0A0B4J1U6 114 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SRFP11831 508 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CD70P32970 193 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 HYAL1Q12794 435 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 GAGE5Q13069 117 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 GAGE6Q13070 117 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PLPPR5Q32ZL2 321 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 Q6ZNB5 142 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 GEMIN7Q9H840 131 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 TMEM106BQ9NUM4 274 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 TAC3Q9UHF0 121 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 F11RQ9Y624 299 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 IGHV1-69-2A0A0G2JMI3 117 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 FCN1O00602 326 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNHIT1O43257 154 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 KRASP01116 189 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF823P16415 610 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SRIP30626 198 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 HRH1P35367 487 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 RELBQ01201 579 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 MEP1BQ16820 701 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 Q56UQ5 140 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SAXO1Q8IYX7 474 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PNKDQ8N490 385 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 OR4C13Q8NGP0 309 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 GNPNAT1Q96EK6 184 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 KLHDC3Q9BQ90 382 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 HSPB9Q9BQS6 159 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CSTL1Q9H114 145 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 IL21Q9HBE4 155 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 WNT16Q9UBV4 365 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 KLF13Q9Y2Y9 288 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 TRAV9-1A0A075B6T8 112 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SH2D1BO14796 132 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 MPLP40238 635 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZP2Q05996 745 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 FAM182BQ5T319 152 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NKX2-4Q9H2Z4 354 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF665Q9H7R5 613 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 DECR2Q9NUI1 292 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CLEC1BQ9P126 229 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 BRWD3Q6RI45 1802 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 A0A1W2PS18 150 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 WNT2P09544 360 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SRP14P37108 136 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 NMUP48645 174 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 Q0VG73 95 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 FAM78BQ5VT40 261 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZADH2Q8N4Q0 377 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 RAB1CQ92928 201 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 B9D1Q9UPM9 204 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 HILPDAQ9Y5L2 63 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF205O95201 554 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 FCGR2BP31994 310 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 CCR2P41597 374 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 RUNX1Q01196 453 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ID3Q02535 119 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 HLA-BQ31612 363 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 DGAT2L6Q6ZPD8 337 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 BPIFA4PQ86YQ2 179 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 A0A1W2PRS3 328 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 OR5B21A6NL26 309 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SSTR5P35346 364 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 MMDQ15546 238 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 LRRC10Q5BKY1 277 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 TMEM252Q8N6L7 170 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms