RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FAM186AA6NE01 2351 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 TDGF1P13385 188 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 RPL30P62888 115 aaKnown RBP13.85□□□□□ -0.19
TPM1-228ENST00000560975 CADM4Q8NFZ8 388 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 CCDC74BQ96LY2 380 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 PRRG4Q9BZD6 226 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 CELSR3Q9NYQ7 3312 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 LRRC30A6NM36 301 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 S1PR2O95136 353 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 QTRT1Q9BXR0 403 aaKnown RBP13.85□□□□□ -0.19
TPM1-228ENST00000560975 ZNF586Q9NXT0 402 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 TBL2Q9Y4P3 447 aaKnown RBP13.85□□□□□ -0.19
TPM1-228ENST00000560975 FREM2Q5SZK8 3169 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 ARL14EPLP0DKL9 152 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 PCOLCEQ15113 449 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 STARD4Q96DR4 205 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
TPM1-228ENST00000560975 TRBV6-6A0A0A6YYG2 114 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
TPM1-228ENST00000560975 LINC00205P59089 165 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 ARF1P84077 181 aaKnown RBP13.84□□□□□ -0.19
TPM1-228ENST00000560975 PSG7Q13046 419 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 COLCA1Q6ZS62 124 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 ATOH7Q8N100 152 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 OR10D3Q8NH80 312 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 WNT10AQ9GZT5 417 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 PRDM6Q9NQX0 595 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.84□□□□□ -0.19
TPM1-228ENST00000560975 GJE1A6NN92 205 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 CA6P23280 308 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 AMTP48728 403 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 RBX1P62877 108 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 Q8N976 141 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 DEPPQ9NTK1 212 aa13.84□□□□□ -0.19
TPM1-228ENST00000560975 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 ESDP10768 282 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 HINT1P49773 126 aaPredicted RBP13.83□□□□□ -0.2
TPM1-228ENST00000560975 SSR4P51571 173 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 FOXG1P55316 489 aaPredicted RBP13.83□□□□□ -0.2
TPM1-228ENST00000560975 SLC35B1P78383 322 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 GGNQ86UU5 652 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 OR2D2Q9H210 308 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 IL36BQ9NZH7 164 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 K7EN84 100 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 GPX1P07203 203 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 C1orf174Q8IYL3 243 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 RNF2Q99496 336 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 NRN1Q9NPD7 142 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 LAMTOR2Q9Y2Q5 125 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 MED12LQ86YW9 2145 aa13.83□□□□□ -0.2
TPM1-228ENST00000560975 C17orf98A8MV24 154 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 HYPMO75409 117 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 WIPI1Q5MNZ9 446 aaPredicted RBP13.82□□□□□ -0.2
TPM1-228ENST00000560975 LEMD1Q68G75 181 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 UNQ5815/PRO19632Q6UWF5 114 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 ADAMTS20P59510 1910 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 ZNF503-AS2A6NEH8 195 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 RFPL3SP0C7P2 107 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 B3GALT5-AS1P59052 145 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 Q8N7P7 452 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 APH1AQ96BI3 265 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 UQCR10Q9UDW1 63 aa13.82□□□□□ -0.2
TPM1-228ENST00000560975 RRHO14718 337 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 CTRLP40313 264 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 COTL1Q14019 142 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 AGBL5Q8NDL9 886 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 C22orf15Q8WYQ4 148 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
TPM1-228ENST00000560975 GTF3C1Q12789 2109 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 IGLC2P0DOY2 106 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 EPHA8P29322 1005 aaPredicted RBP13.81□□□□□ -0.2
TPM1-228ENST00000560975 HTD2P86397 168 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 SYT13Q7L8C5 426 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 ST6GALNAC3Q8NDV1 305 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 C5orf30Q96GV9 206 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 NAT8BQ9UHF3 227 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 RNF212BA8MTL3 300 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 CD1BP29016 333 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 RNF151Q2KHN1 245 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 Q6P435 159 aa13.81□□□□□ -0.2
TPM1-228ENST00000560975 TIPARPQ7Z3E1 657 aaKnown RBP13.81□□□□□ -0.2
TPM1-228ENST00000560975 YTHDF2Q9Y5A9 579 aaKnown RBP13.81□□□□□ -0.2
TPM1-228ENST00000560975 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
TPM1-228ENST00000560975 ANKRD30BLA7E2S9 258 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 NPIPB11E5RHQ5 1161 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 OR2H2O95918 312 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 LGALS4P56470 323 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 RPL31P62899 125 aaKnown RBP13.8□□□□□ -0.2
TPM1-228ENST00000560975 SPATA46Q5T0L3 261 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 MIC13Q5XKP0 118 aa13.8□□□□□ -0.2
TPM1-228ENST00000560975 H2BFWTQ7Z2G1 175 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms