RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RPS16P62249 146 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 RPL30P62888 115 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 SUPT4H1P63272 117 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 TMEM268Q5VZI3 342 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 GSG1LQ6UXU4 331 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 LHFPL4Q7Z7J7 247 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 THNSL2Q86YJ6 484 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 CIARTQ8N365 385 aaPredicted RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 DMBX1Q8NFW5 382 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 OR2T10Q8NGZ9 312 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 VSTM2AQ8TAG5 236 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 C5orf30Q96GV9 206 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 TSNAXQ99598 290 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 PDCD10Q9BUL8 212 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 ZFP57Q9NU63 452 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 ZNRD1Q9P1U0 126 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 MGAT4CQ9UBM8 478 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 ARHGAP32A7KAX9 2087 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 IGHV3OR16-10A0A075B7F0 116 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 C13orf42A0A1B0GVH6 325 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 C5orf51A6NDU8 294 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 BTBD17A6NE02 478 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 FAM25EA8MYX2 175 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 H0YJW9 148 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 CRYZL1O95825 349 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 HOXB5P09067 269 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 HLA-GP17693 338 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 AANATQ16613 207 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 ANKRD55Q3KP44 614 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 VMA21Q3ZAQ7 101 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 TMEM177Q53S58 311 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 OR2B11Q5JQS5 317 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 H2BFWTQ7Z2G1 175 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 SELENOHQ8IZQ5 122 aaKnown RBP7.45□□□□□ -1.22
ACTN1-218ENST00000556343 DDB2Q92466 427 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
ACTN1-218ENST00000556343 GPHA2Q96T91 129 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 MEGF9Q9H1U4 602 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 TMEM160Q9NX00 188 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 C1RLQ9NZP8 487 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 KIAA1456Q9P272 454 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
ACTN1-218ENST00000556343 CSMD2Q7Z408 3487 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 A0A1B0GU03 582 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 GOSR2O14653 212 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 TIMM23O14925 209 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 PFDN1O60925 122 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 SNAPC5O75971 98 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 S1PR2O95136 353 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 MOSP00540 346 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 KRASP01116 189 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 AVPP01185 164 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 SULT1A3P0DMM9 295 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 SULT1A4P0DMN0 295 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 DYNLT3P51808 116 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 DIAPH2-AS1Q14236 149 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 HES1Q14469 280 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 FCN2Q15485 313 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 ZNF585BQ52M93 769 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 BRD3OSQ6XYD6 125 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-218ENST00000556343 C9orf139Q6ZV77 190 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 CADM3Q8N126 398 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 PIP4P2Q8N4L2 257 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 OR4A16Q8NH70 328 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 OR4A5Q8NH83 315 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 CHAC2Q8WUX2 184 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 ZDHHC16Q969W1 377 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 R3HDM4Q96D70 268 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 FKBP11Q9NYL4 201 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 MMP24Q9Y5R2 645 aa7.44□□□□□ -1.22
ACTN1-218ENST00000556343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.224e-22■■■■■ 29.1
ACTN1-218ENST00000556343 IGHV3-72A0A0B4J1Y9 119 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 A0A0B4J293 547 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 A0A0U1RQK1 487 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 DBX1A6NMT0 343 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 MARCH11A6NNE9 402 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 FAM90A9PA6NNJ1 464 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 RAMP3O60896 148 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 RBMXL2O75526 392 aaKnown RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 OR2A4O95047 310 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 SPDEFO95238 335 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 RLN2P04090 185 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 SLC25A6P12236 298 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 TMEM11P17152 192 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 HABP2Q14520 560 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 KLF17Q5JT82 389 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 FAM120AOSQ5T036 256 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 RUSC1-AS1Q66K80 236 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 RBMS3Q6XE24 437 aaKnown RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 LYZL2Q7Z4W2 148 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 AKAP14Q86UN6 197 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms