RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GYPAP02724 150 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
XRCC3-208ENST00000554811 TSPAN7P41732 249 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 ATP5G3P48201 142 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 PRSS8Q16651 343 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 ENY2Q9NPA8 101 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 SPRR3Q9UBC9 169 aa9.98□□□□□ -0.81
XRCC3-208ENST00000554811 LAMA5O15230 3695 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 M0R1B8 84 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 IGHV3-48P01763 117 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 COTL1Q14019 142 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 R3HDM4Q96D70 268 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 FAM122AQ96E09 287 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 QTRT1Q9BXR0 403 aaKnown RBP9.97□□□□□ -0.81
XRCC3-208ENST00000554811 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 TP53TG5Q9Y2B4 290 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 TIMM8BQ9Y5J9 83 aaPredicted RBP9.97□□□□□ -0.81
XRCC3-208ENST00000554811 DMXL2Q8TDJ6 3036 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 SMPD2O60906 423 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 GTF3AQ92664 365 aaKnown RBP9.97□□□□□ -0.81
XRCC3-208ENST00000554811 GRIFINA4D1Z8 144 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 IFITM10A6NMD0 228 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
XRCC3-208ENST00000554811 TCL1AP56279 114 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 ATMQ13315 3056 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 LRRC75BQ2VPJ9 315 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 MIC13Q5XKP0 118 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 UNQ6494/PRO21346Q6UXR6 183 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 COLCA1Q6ZS62 124 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 IL22RA2Q969J5 263 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
XRCC3-208ENST00000554811 PRB4P10163 310 aaPredicted RBP9.96□□□□□ -0.81
XRCC3-208ENST00000554811 IGHV1-2P23083 117 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 TCF23Q7RTU1 214 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 OR4X1Q8NH49 305 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM103A1Q9BTL3 118 aaKnown RBP9.96□□□□□ -0.81
XRCC3-208ENST00000554811 TMEM147Q9BVK8 224 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 EGLN1Q9GZT9 426 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 OPN3Q9H1Y3 402 aaPredicted RBP9.96□□□□□ -0.81
XRCC3-208ENST00000554811 SDF2L1Q9HCN8 221 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 COL5A1P20908 1838 aaPredicted RBP9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A10PA6NDY2 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A18PA6NE21 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A16PA6NEW6 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A20PA6NIJ5 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A8PA6NJQ4 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A7PA6NKC0 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 MARCH11A6NNE9 402 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A22PA8MWA6 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A12PA8MX19 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A5PA8MXJ8 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A23PA8MXZ1 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A15PP0C7V4 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A13PP0C7W8 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A14PP0C7W9 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 FAM90A24PP0C7X0 464 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 TMEM45BQ96B21 275 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 RPH3ALQ9UNE2 315 aa9.96□□□□□ -0.81
XRCC3-208ENST00000554811 MYOD1P15172 320 aa9.96□□□□□ -0.82
XRCC3-208ENST00000554811 TMEM178AQ8NBL3 297 aa9.96□□□□□ -0.82
XRCC3-208ENST00000554811 BCL2L2Q92843 193 aaPredicted RBP9.96□□□□□ -0.82
XRCC3-208ENST00000554811 CISD1Q9NZ45 108 aaKnown RBP9.96□□□□□ -0.82
XRCC3-208ENST00000554811 MDFIC2A0A1B0GVS7 189 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 DUXBA0A1W2PPF3 345 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 APELAP0DMC3 54 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 DEFB109BQ30KR1 87 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 Q6P435 159 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 LYG1Q8N1E2 194 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 HIST3H2BBQ8N257 126 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 RND1Q92730 232 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 NEIL1Q96FI4 390 aaPredicted RBP9.95□□□□□ -0.82
XRCC3-208ENST00000554811 SIRT7Q9NRC8 400 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 SPAARA0A1B0GVQ0 90 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 LRRC30A6NM36 301 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 ZNF497Q6ZNH5 498 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 MOGAT3Q86VF5 341 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 NCOR2Q9Y618 2525 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 A0A1W2PNU3 283 aaPredicted RBP9.95□□□□□ -0.82
XRCC3-208ENST00000554811 LINC00473A8K010 186 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 MGST1P10620 155 aaKnown RBP9.95□□□□□ -0.82
XRCC3-208ENST00000554811 CD81P60033 236 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 RPL23P62829 140 aaKnown RBP9.95□□□□□ -0.82
XRCC3-208ENST00000554811 SAXO1Q8IYX7 474 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 LRFN3Q9BTN0 628 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 LINC00470Q9BZP3 86 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 HIPK2Q9H2X6 1198 aa9.95□□□□□ -0.82
XRCC3-208ENST00000554811 CTXND1A0A1B0GTU2 59 aa9.94□□□□□ -0.82
XRCC3-208ENST00000554811 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
XRCC3-208ENST00000554811 FOXF2Q12947 444 aa9.94□□□□□ -0.82
XRCC3-208ENST00000554811 MOB1BQ7L9L4 216 aa9.94□□□□□ -0.82
XRCC3-208ENST00000554811 ZNF645Q8N7E2 425 aa9.94□□□□□ -0.82
XRCC3-208ENST00000554811 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
XRCC3-208ENST00000554811 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
XRCC3-208ENST00000554811 OTOGLQ3ZCN5 2332 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms