RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 FGF21Q9NSA1 209 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 IL36BQ9NZH7 164 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 YLPM1P49750 1951 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 TMEM238C9JI98 176 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 TOMM40O96008 361 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 RPEL1Q2QD12 228 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 CFHR5Q9BXR6 569 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 IL36GQ9NZH8 169 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 HSPB7Q9UBY9 170 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 ATG2AQ2TAZ0 1938 aa11.03□□□□□ -0.64
GAPVD1-220ENST00000497580 RNF212BA8MTL3 300 aa11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 CLCF1Q9UBD9 225 aa11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 C19orf25Q9UFG5 118 aaPredicted RBP11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 ARL2-SNX15V9GYD0 113 aa11.02□□□□□ -0.64
GAPVD1-220ENST00000497580 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF324O75467 553 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CLDN14O95500 239 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 ACSF3Q4G176 576 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CORO2AQ92828 525 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 C17orf112F2Z3M2 114 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 HSBP1O75506 76 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CA2P00918 260 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CTXN2P0C2S0 81 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 IGFBP4P22692 258 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 SUMO3P55854 103 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 PSG7Q13046 419 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 DOLPP1Q86YN1 238 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 MKXQ8IYA7 352 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 GMPPAQ96IJ6 420 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 CRIM1Q9NZV1 1036 aa11.02□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF891A8MT65 544 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 SYNGR1O43759 233 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 RPL31P62899 125 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 RAC1P63000 192 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 HIST3H3Q16695 136 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 Q5PR19 223 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 PCSK4Q6UW60 755 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 MTCH1Q9NZJ7 389 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 S1PR2O95136 353 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 DAZAP2Q15038 168 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 PDLIM3Q53GG5 364 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 FGFBP3Q8TAT2 258 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 SSMEM1Q8WWF3 244 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 RAMP3O60896 148 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 NUDT3O95989 172 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 HYAL1Q12794 435 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 OR5A2Q8NGI9 324 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 TIMM9Q9Y5J7 89 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 KIAA1549Q9HCM3 1950 aa11.01□□□□□ -0.65
GAPVD1-220ENST00000497580 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 A0A1W2PN81 502 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 TNFSF11O14788 317 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 GOSR1O95249 250 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 PRRX1P54821 245 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 KIAA0895LQ68EN5 471 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 LIN7CQ9NUP9 197 aaKnown RBP11□□□□□ -0.65
GAPVD1-220ENST00000497580 TRAPPC2LQ9UL33 140 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 TMPRSS2O15393 492 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF324BQ6AW86 544 aaPredicted RBP11□□□□□ -0.65
GAPVD1-220ENST00000497580 RHBDD2Q6NTF9 364 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 IL19Q9UHD0 177 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 DMDP11532 3685 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 K7EN84 100 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 SAP30O75446 220 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 PPBPP02775 128 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 CA6P23280 308 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 OBP2AQ9NY56 170 aa11□□□□□ -0.65
GAPVD1-220ENST00000497580 IGHV1-69-2A0A0G2JMI3 117 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 hCG_38984A0A1B0GV85 526 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 M0R2Z0 102 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 SYNGR3O43761 229 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 CA1P00915 261 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 IGLL1P15814 213 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 CRYGSP22914 178 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 MIC13Q5XKP0 118 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 ASCL4Q6XD76 172 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 NIT1Q86X76 327 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 OR2Y1Q8NGV0 311 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 UBE2ZQ9H832 354 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 SPTBN2O15020 2390 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms