RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WDR25Q64LD2 544 aaPredicted RBP9.42□□□□□ -0.9
VAPB-204ENST00000475243 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
VAPB-204ENST00000475243 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 KCNK17Q96T54 332 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 LOC107984156A0A0G2JMH3 177 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 A8MWL6 223 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 THY1P04216 161 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 ARL17AQ8IVW1 177 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 RNF115Q9Y4L5 304 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 KBTBD11O94819 623 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 CHAC2Q8WUX2 184 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
VAPB-204ENST00000475243 SBF2Q86WG5 1849 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 LOC101059948A0A1B0GTJ6 334 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 A0A1W2PS18 150 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 C4orf51C9J302 202 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 COX6A1P12074 109 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 RND2P52198 227 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 CA2P00918 260 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 CRYBA2P53672 197 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 FAM74A4Q5TZK3 123 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 EP300Q09472 2414 aaPredicted RBP9.41□□□□□ -0.9
VAPB-204ENST00000475243 SCN5AQ14524 2016 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
VAPB-204ENST00000475243 A6NDN8 102 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 NUDT16L1Q9BRJ7 211 aaKnown RBP9.41□□□□□ -0.9
VAPB-204ENST00000475243 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 PITPNC1Q9UKF7 332 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 ZFP30Q9Y2G7 519 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 RAXQ9Y2V3 346 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 WNT9BO14905 357 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 BCL2P10415 239 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 GLIPR1P48060 266 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 RAB37Q96AX2 223 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 S4R3C0 116 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 CD74P04233 296 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 NUP37Q8NFH4 326 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 MEGF10Q96KG7 1140 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 TP53RKQ96S44 253 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 MRPS18AQ9NVS2 196 aaKnown RBP9.41□□□□□ -0.9
VAPB-204ENST00000475243 VAX1Q5SQQ9 334 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 C1orf174Q8IYL3 243 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 DLL1O00548 723 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 MFAP4P55083 255 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 GCSAMQ8N6F7 178 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 FOXJ2Q9P0K8 574 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 HOXD4P09016 255 aaPredicted RBP9.41□□□□□ -0.9
VAPB-204ENST00000475243 CX3CL1P78423 397 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 SERF2P84101 59 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 COX19Q49B96 90 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 ZNRF1Q8ND25 227 aa9.41□□□□□ -0.9
VAPB-204ENST00000475243 ZG16O60844 167 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 WISP3O95389 354 aaPredicted RBP9.4□□□□□ -0.9
VAPB-204ENST00000475243 ACSF3Q4G176 576 aaPredicted RBP9.4□□□□□ -0.9
VAPB-204ENST00000475243 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 GPR146Q96CH1 333 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 RARRES2Q99969 163 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 A0A1W2PQM1 296 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 S1PR2O95136 353 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 PRSS2P07478 247 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 MYLKQ15746 1914 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 EIF4EBP2Q13542 120 aaPredicted RBP9.4□□□□□ -0.9
VAPB-204ENST00000475243 MBNL2Q5VZF2 373 aaKnown RBP9.4□□□□□ -0.9
VAPB-204ENST00000475243 TRGC2P03986 189 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 STARD6P59095 220 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 ATP5G2Q06055 141 aa9.4□□□□□ -0.9
VAPB-204ENST00000475243 CD99P14209 185 aa9.4□□□□□ -0.91
VAPB-204ENST00000475243 TMEM177Q53S58 311 aa9.4□□□□□ -0.91
VAPB-204ENST00000475243 SELENOHQ8IZQ5 122 aaKnown RBP9.4□□□□□ -0.91
VAPB-204ENST00000475243 PNKDQ8N490 385 aa9.4□□□□□ -0.91
VAPB-204ENST00000475243 SRSF12Q8WXF0 261 aaKnown RBP9.4□□□□□ -0.91
VAPB-204ENST00000475243 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
VAPB-204ENST00000475243 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 TAF15Q92804 592 aaKnown RBP eCLIP9.39□□□□□ -0.91
VAPB-204ENST00000475243 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 GPX1P07203 203 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 P2RY4P51582 365 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 LAMTOR1Q6IAA8 161 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 SCN10AQ9Y5Y9 1956 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 MARCH11A6NNE9 402 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 QTRT1Q9BXR0 403 aaKnown RBP9.39□□□□□ -0.91
VAPB-204ENST00000475243 IGLV1-36A0A0B4J1U3 117 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 TMEM262E9PQX1 116 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 ISG15P05161 165 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms